RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 ST3GAL2Q16842 350 aa12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 LONRF2Q1L5Z9 754 aa12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 ISXQ2M1V0 245 aa12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 GPR33Q49SQ1 333 aa12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 IGF2-ASQ6U949 168 aa12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 FAM151BQ6UXP7 276 aa12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 CHST15Q7LFX5 561 aaPredicted RBP12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 LSMEM2Q8N112 164 aa12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 OR4K2Q8NGD2 314 aa12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 ZNF398Q8TD17 642 aa12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 STYXQ8WUJ0 223 aa12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 ZCCHC14Q8WYQ9 949 aaKnown RBP12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 PEX13Q92968 403 aa12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 SH3KBP1Q96B97 665 aa12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 ULK4Q96C45 1275 aa12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 GFM1Q96RP9 751 aaKnown RBP12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 DPYSL5Q9BPU6 564 aa12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 APOL2Q9BQE5 337 aa12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 STN1Q9H668 368 aaKnown RBP12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 SUDS3Q9H7L9 328 aaPredicted RBP12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 EIF2B3Q9NR50 452 aaKnown RBP12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 TMPRSS11EQ9UL52 423 aa12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 RIMKLBQ9ULI2 386 aa12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 ARL5AQ9Y689 179 aa12.39□□□□□ -0.43
CDCA4P3-201ENST00000442572 ACACAQ13085 2346 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 RHPN2P1A8MT19 583 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 GAPDHSO14556 408 aaPredicted RBP12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 LDB2O43679 373 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 USP12O75317 370 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 CSO75390 466 aaKnown RBP12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 SRP72O76094 671 aaKnown RBP12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 PRAMEF1O95521 474 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 ECEL1O95672 775 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 F3P13726 295 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 ZNF7P17097 686 aaPredicted RBP12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 MLLT3P42568 568 aaPredicted RBP12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 LMAN1P49257 510 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 XIAPP98170 497 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 NFATC2Q13469 925 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 BIRC2Q13490 618 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 SQSTM1Q13501 440 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 OLIG2Q13516 323 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 SNX1Q13596 522 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 WASH2PQ6VEQ5 465 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 SPRED1Q7Z699 444 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 CCNJLQ8IV13 435 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 SFRP1Q8N474 314 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 ARL14Q8N4G2 192 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 GDAP1Q8TB36 358 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 LIN37Q96GY3 246 aaPredicted RBP12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 TMEM74Q96NL1 305 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 LRRN3Q9H3W5 708 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 ETNK1Q9HBU6 452 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 SARS2Q9NP81 518 aaKnown RBP12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 WASH6PQ9NQA3 447 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 RAB6BQ9NRW1 208 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 NLE1Q9NVX2 485 aaPredicted RBP12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 RNF215Q9Y6U7 377 aa12.38□□□□□ -0.43
CDCA4P3-201ENST00000442572 HEATR9A2RTY3 570 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 A6NCN8 305 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 MROH6A6NGR9 719 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 PRR19A6NJB7 356 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 D6RAR5 112 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 PGRMC1O00264 195 aaKnown RBP12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 BUD23O43709 281 aaKnown RBP12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 DXOO77932 396 aaKnown RBP12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 RPLP0P05388 317 aaKnown RBP12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 RALBP11234 206 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 ACP5P13686 325 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 ITGALP20701 1170 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 CCKBRP32239 447 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 CXCR5P32302 372 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 GPLD1P80108 840 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 B4GALNT1Q00973 533 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 DMPKQ09013 629 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 EIF3IQ13347 325 aaKnown RBP12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 SPARCL1Q14515 664 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 INSCQ1MX18 579 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 SKIDA1Q1XH10 827 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 GPRC6AQ5T6X5 926 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 AGAP9Q5VTM2 703 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 ARMC3Q5W041 872 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 IYDQ6PHW0 289 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 NLRP9Q7RTR0 991 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 GSTA5Q7RTV2 222 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 SNX20Q7Z614 316 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 PROSER1Q86XN7 944 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 SLC35F6Q8N357 371 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 PRELID2Q8N945 189 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 DNAAF3Q8N9W5 541 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 ACTRT1Q8TDG2 376 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 TMEM159Q96B96 161 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 RANBP9Q96S59 729 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 EPB41L1Q9H4G0 881 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 ASB8Q9H765 288 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 UCK1Q9HA47 277 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 RABGEF1Q9UJ41 708 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 PLEKHM1Q9Y4G2 1056 aa12.37□□□□□ -0.43
CDCA4P3-201ENST00000442572 PCYT1BQ9Y5K3 369 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms