RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 TOX3O15405 576 aaPredicted RBP7.69□□□□□ -1.18
CD44-211ENST00000442151 NUAK1O60285 661 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 PRAMEF10O60809 474 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 IPO7O95373 1038 aaKnown RBP7.69□□□□□ -1.18
CD44-211ENST00000442151 NDST3O95803 873 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 VIPP01282 170 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 KRT1P04264 644 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 HLA-DQB2P05538 268 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 CD48P09326 243 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 F3P13726 295 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 AMD1P17707 334 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 HALP42357 657 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 MC2RQ01718 297 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 PRPSAP1Q14558 356 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 SPA17Q15506 151 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 ATP13A4Q4VNC1 1196 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 HENMT1Q5T8I9 393 aaKnown RBP7.69□□□□□ -1.18
CD44-211ENST00000442151 TMC3Q7Z5M5 1100 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 LRRTM4Q86VH4 590 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 BPHLQ86WA6 291 aaPredicted RBP7.69□□□□□ -1.18
CD44-211ENST00000442151 DTX1Q86Y01 620 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 SFRP1Q8N474 314 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 NCSTNQ92542 709 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 SCAMP4Q969E2 229 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 HAUS1Q96CS2 278 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 IMP4Q96G21 291 aaKnown RBP7.69□□□□□ -1.18
CD44-211ENST00000442151 MRGPRX2Q96LB1 330 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 TIMM29Q9BSF4 260 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 CAAP1Q9H8G2 361 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 FBXO8Q9NRD0 319 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 PDP2Q9P2J9 529 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 LRRK1Q38SD2 2015 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 ASXL3Q9C0F0 2248 aa7.69□□□□□ -1.18
CD44-211ENST00000442151 ZNF891A8MT65 544 aaPredicted RBP7.68□□□□□ -1.18
CD44-211ENST00000442151 PSTPIP1O43586 416 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 DNAJC6O75061 913 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 STK10O94804 968 aaKnown RBP7.68□□□□□ -1.18
CD44-211ENST00000442151 ZRANB2O95218 330 aaKnown RBP eCLIP7.68□□□□□ -1.18
CD44-211ENST00000442151 PRLP01236 227 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 THRAP10827 490 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 XRCC1P18887 633 aaPredicted RBP7.68□□□□□ -1.18
CD44-211ENST00000442151 IDSP22304 550 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 CYLC1P35663 651 aaPredicted RBP7.68□□□□□ -1.18
CD44-211ENST00000442151 MAGEA1P43355 309 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 TAS2R40P59535 323 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 PDE1BQ01064 536 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 GBE1Q04446 702 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 NIPAL4Q0D2K0 466 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 ITGA9Q13797 1035 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 MAP7Q14244 749 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 ASTE1Q2TB18 679 aaPredicted RBP7.68□□□□□ -1.18
CD44-211ENST00000442151 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.68□□□□□ -1.18
CD44-211ENST00000442151 ZNF449Q6P9G9 518 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 WASH2PQ6VEQ5 465 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 VSTM4Q8IW00 320 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 CCDC170Q8IYT3 715 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.68□□□□□ -1.18
CD44-211ENST00000442151 PQLC3Q8N755 202 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 PLD5Q8N7P1 536 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 BEND7Q8N7W2 519 aaPredicted RBP7.68□□□□□ -1.18
CD44-211ENST00000442151 SLC37A2Q8TED4 501 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 UBE2Q2Q8WVN8 375 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 RAPGEF5Q92565 580 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 P3H4Q92791 437 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 GLYATL1Q969I3 302 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 ZDHHC12Q96GR4 267 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 RBM41Q96IZ5 413 aaKnown RBP7.68□□□□□ -1.18
CD44-211ENST00000442151 ZNF514Q96K75 400 aaPredicted RBP7.68□□□□□ -1.18
CD44-211ENST00000442151 NSMCE3Q96MG7 304 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 AGAP3Q96P47 875 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 PLEKHG4BQ96PX9 1271 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 VPS35Q96QK1 796 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 GLOD4Q9HC38 313 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 WASH6PQ9NQA3 447 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 ABHD10Q9NUJ1 306 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 FAM153AQ9UHL3 310 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 NENFQ9UMX5 172 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 RP1P56715 2156 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 LILRA5A6NI73 299 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 EFCAB7A8K855 629 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 C9orf172C9J069 976 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 KCNK1O00180 336 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 POLR1CO15160 346 aaPredicted RBP7.68□□□□□ -1.18
CD44-211ENST00000442151 SNX2O60749 519 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 CDK14O94921 469 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 SOD1P00441 154 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 MT-ND3P03897 115 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 FUCA1P04066 466 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 FGF3P11487 239 aaPredicted RBP7.68□□□□□ -1.18
CD44-211ENST00000442151 ACP5P13686 325 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 HGFP14210 728 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 PLA2G2AP14555 144 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 ITIH1P19827 911 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 CCR10P46092 362 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 HADHBP55084 474 aaKnown RBP7.68□□□□□ -1.18
CD44-211ENST00000442151 C16orf72Q14CZ0 275 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 INSCQ1MX18 579 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 LDLRAP1Q5SW96 308 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 CCDC181Q5TID7 509 aa7.68□□□□□ -1.18
CD44-211ENST00000442151 ITPRIPL1Q6GPH6 555 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms