RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 CLDN1O95832 211 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 FGGP02679 453 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 KLKB1P03952 638 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 DNTTP04053 509 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 WNT1P04628 370 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 IGHV4-34P06331 123 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 EPHX1P07099 455 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 HMBSP08397 361 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 GNLYP22749 145 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 SLC5A2P31639 672 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 L1CAMP32004 1257 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 PTPN7P35236 360 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 ADRA1BP35368 520 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 KIR2DL2P43627 348 aaPredicted RBP4.82□□□□□ -1.64
PTPN4-206ENST00000441089 UQCRFS1P47985 274 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 TUBP50607 506 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 CDH6P55285 790 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 TBX4P57082 545 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 PCBP3P57721 371 aaKnown RBP4.82□□□□□ -1.64
PTPN4-206ENST00000441089 CYP4F2P78329 520 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 MRPS25P82663 173 aaKnown RBP4.82□□□□□ -1.64
PTPN4-206ENST00000441089 OVGP1Q12889 678 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 TUBB2AQ13885 445 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 EIF4HQ15056 248 aaKnown RBP4.82□□□□□ -1.64
PTPN4-206ENST00000441089 TGIF1Q15583 401 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 PPP2R5EQ16537 467 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 DPYSL2Q16555 572 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 HADHQ16836 314 aaKnown RBP4.82□□□□□ -1.64
PTPN4-206ENST00000441089 LONRF2Q1L5Z9 754 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 SPATS1Q496A3 300 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 LACTB2Q53H82 288 aaPredicted RBP4.82□□□□□ -1.64
PTPN4-206ENST00000441089 BOLA3Q53S33 107 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 BRMS1LQ5PSV4 323 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 C10orf120Q5SQS8 335 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 HECTD3Q5T447 861 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 ERMARDQ5T6L9 678 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 SEL1L2Q5TEA6 688 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 PIK3R6Q5UE93 754 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 MANEALQ5VSG8 457 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 KAZNQ674X7 775 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 NADSYN1Q6IA69 706 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 TTC27Q6P3X3 843 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 NPNTQ6UXI9 565 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 RSRC2Q7L4I2 434 aaKnown RBP4.82□□□□□ -1.64
PTPN4-206ENST00000441089 TMC3Q7Z5M5 1100 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 IQCHQ86VS3 1027 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 JAMLQ86YT9 394 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 ZNF683Q8IZ20 524 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 RCOR2Q8IZ40 523 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 ZNF276Q8N554 614 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 PRELID2Q8N945 189 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 TEX19Q8NA77 164 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 NOA1Q8NC60 698 aaKnown RBP4.82□□□□□ -1.64
PTPN4-206ENST00000441089 SPATA4Q8NEY3 305 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 PCDH19Q8TAB3 1148 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 RNF139Q8WU17 664 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 GOLGA1Q92805 767 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 NTAN1Q96AB6 310 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 MYEOVQ96EZ4 313 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 P2RY11Q96G91 374 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 RBM41Q96IZ5 413 aaKnown RBP4.82□□□□□ -1.64
PTPN4-206ENST00000441089 EAF1Q96JC9 268 aaPredicted RBP4.82□□□□□ -1.64
PTPN4-206ENST00000441089 SERPINB11Q96P15 392 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 CSPG4P5Q96PW8 444 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 FAM118BQ9BPY3 351 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 ORAI3Q9BRQ5 295 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 TUBB2BQ9BVA1 445 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 TRIM62Q9BVG3 475 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 HEMGNQ9BXL5 484 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 AP1M1Q9BXS5 423 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 OSBPL8Q9BZF1 889 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 FOXP3Q9BZS1 431 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 TKTL2Q9H0I9 626 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 OSBPL2Q9H1P3 480 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 TMEM245Q9H330 911 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 DHX35Q9H5Z1 703 aaKnown RBP4.82□□□□□ -1.64
PTPN4-206ENST00000441089 ZNF71Q9NQZ8 489 aaPredicted RBP4.82□□□□□ -1.64
PTPN4-206ENST00000441089 ETNK2Q9NVF9 386 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 DDX56Q9NY93 547 aaKnown RBP4.82□□□□□ -1.64
PTPN4-206ENST00000441089 RRN3Q9NYV6 651 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 PRR13Q9NZ81 148 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 NCKIPSDQ9NZQ3 722 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 CWC15Q9P013 229 aaKnown RBP4.82□□□□□ -1.64
PTPN4-206ENST00000441089 MARCH2Q9P0N8 246 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 TCFL5Q9UL49 500 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 SCML1Q9UN30 329 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 NCKAP1Q9Y2A7 1128 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 SLC27A6Q9Y2P4 619 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 MFHAS1Q9Y4C4 1052 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 ZGRF1Q86YA3 2104 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 NOTCH1P46531 2555 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 PKD1L1Q8TDX9 2849 aa4.82□□□□□ -1.64
PTPN4-206ENST00000441089 GOLGA6L7A0A1B0GV03 622 aa4.81□□□□□ -1.64
PTPN4-206ENST00000441089 A0A1W2PR77 199 aa4.81□□□□□ -1.64
PTPN4-206ENST00000441089 NEMP2A6NFY4 417 aa4.81□□□□□ -1.64
PTPN4-206ENST00000441089 TMX2-CTNND1H3BSU7 103 aa4.81□□□□□ -1.64
PTPN4-206ENST00000441089 CST8O60676 142 aa4.81□□□□□ -1.64
PTPN4-206ENST00000441089 STC2O76061 302 aa4.81□□□□□ -1.64
PTPN4-206ENST00000441089 SLU7O95391 586 aaKnown RBP4.81□□□□□ -1.64
PTPN4-206ENST00000441089 MOCS2O96007 188 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms