RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 OR6C4Q8NGE1 309 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 HEXDCQ8WVB3 486 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 NAT6Q93015 286 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 TRIM44Q96DX7 344 aaPredicted RBP11.68□□□□□ -0.54
HSPG2-206ENST00000439717 CDKN2AIPNLQ96HQ2 116 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 TTC25Q96NG3 672 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 IL22Q9GZX6 179 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 DDX47Q9H0S4 455 aaKnown RBP11.68□□□□□ -0.54
HSPG2-206ENST00000439717 SUDS3Q9H7L9 328 aaPredicted RBP11.68□□□□□ -0.54
HSPG2-206ENST00000439717 ARFGAP3Q9NP61 516 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 BFARQ9NZS9 450 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 TAAR2Q9P1P5 351 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 TCAF1Q9Y4C2 921 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 ZNF106Q9H2Y7 1883 aaKnown RBP11.68□□□□□ -0.54
HSPG2-206ENST00000439717 BPTFQ12830 3046 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 CACNA1AO00555 2505 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 KCNJ13O60928 360 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 MTX2O75431 263 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 TUBB4AP04350 444 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 RALBP11234 206 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 MLNP12872 115 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 AK4P27144 223 aaPredicted RBP11.67□□□□□ -0.54
HSPG2-206ENST00000439717 ACTR1BP42025 376 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 PTGIRP43119 386 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 CLCNKAP51800 687 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 ACTR1AP61163 376 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 ACVR1Q04771 509 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 FOXC1Q12948 553 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 PTK6Q13882 451 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 KHDC1Q4VXA5 237 aaKnown RBP11.67□□□□□ -0.54
HSPG2-206ENST00000439717 CCDC38Q502W7 563 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 TSTD2Q5T7W7 516 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 SLC30A9Q6PML9 568 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 CHST15Q7LFX5 561 aaPredicted RBP11.67□□□□□ -0.54
HSPG2-206ENST00000439717 PCGF5Q86SE9 256 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 NXPE1Q8N323 547 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 PNPLA1Q8N8W4 532 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 KYQ8NBH2 561 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 MCUQ8NE86 351 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 IFI44Q8TCB0 444 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 CPT1BQ92523 772 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 ZNF514Q96K75 400 aaPredicted RBP11.67□□□□□ -0.54
HSPG2-206ENST00000439717 TIMM29Q9BSF4 260 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 DPEP2Q9H4A9 486 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 MRM3Q9HC36 420 aaKnown RBP11.67□□□□□ -0.54
HSPG2-206ENST00000439717 SPATS2LQ9NUQ6 558 aaKnown RBP11.67□□□□□ -0.54
HSPG2-206ENST00000439717 SIRPGQ9P1W8 387 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 GULP1Q9UBP9 304 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 CRLS1Q9UJA2 301 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 PADI4Q9UM07 663 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 PCYT1BQ9Y5K3 369 aaPredicted RBP11.67□□□□□ -0.54
HSPG2-206ENST00000439717 ST14Q9Y5Y6 855 aa11.67□□□□□ -0.54
HSPG2-206ENST00000439717 DNMT3AQ9Y6K1 912 aaPredicted RBP11.67□□□□□ -0.54
HSPG2-206ENST00000439717 ARID1BQ8NFD5 2236 aaPredicted RBP11.66□□□□□ -0.54
HSPG2-206ENST00000439717 TRBV5-4A0A0C4DH59 114 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 TCRBV7S3A2A0A539 114 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 B4DGG1 531 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 CFAP99D6REC4 459 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 GPR39O43194 453 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 NOBOXO60393 691 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 PNLIPP16233 465 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 VCLP18206 1134 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 MSH3P20585 1137 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 AKT1P31749 480 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 CA5AP35218 305 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 SESN2P58004 480 aaPredicted RBP11.66□□□□□ -0.54
HSPG2-206ENST00000439717 SHC2P98077 582 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 DR1Q01658 176 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 CACNG1Q06432 222 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 DHX34Q14147 1143 aaKnown RBP11.66□□□□□ -0.54
HSPG2-206ENST00000439717 SMAD1Q15797 465 aaKnown RBP11.66□□□□□ -0.54
HSPG2-206ENST00000439717 C14orf28Q4W4Y0 310 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 ZRANB3Q5FWF4 1079 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 GUSBP11Q6P575 273 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 ZNF534Q76KX8 674 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 EFL1Q7Z2Z2 1120 aaKnown RBP11.66□□□□□ -0.54
HSPG2-206ENST00000439717 C17orf82Q86X59 251 aaPredicted RBP11.66□□□□□ -0.54
HSPG2-206ENST00000439717 KLHL7Q8IXQ5 586 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 PPIL6Q8IXY8 311 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 GALNT15Q8N3T1 639 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 RASGEF1AQ8N9B8 481 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 NAT8LQ8N9F0 302 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 OR13J1Q8NGT2 312 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 ZDHHC1Q8WTX9 485 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 DCUN1D1Q96GG9 259 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 SGSM3Q96HU1 749 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 COPS8Q99627 209 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 XAB2Q9HCS7 855 aaKnown RBP11.66□□□□□ -0.54
HSPG2-206ENST00000439717 ZDHHC3Q9NYG2 299 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.66□□□□□ -0.54
HSPG2-206ENST00000439717 ASIC3Q9UHC3 531 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 WASF3Q9UPY6 502 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 PRKAB1Q9Y478 270 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 PLEKHM1Q9Y4G2 1056 aa11.66□□□□□ -0.54
HSPG2-206ENST00000439717 IGLV3-16A0A075B6K0 115 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 MAGEB16A2A368 324 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 CCDC162PA2VCL2 907 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 CPED1A4D0V7 1026 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 FAM221BA6H8Z2 402 aa11.65□□□□□ -0.54
HSPG2-206ENST00000439717 KLHL33A6NCF5 533 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms