RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 EPHX4Q8IUS5 362 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 CENPLQ8N0S6 344 aaPredicted RBP9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 TMEM86AQ8N2M4 240 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 PTGR2Q8N8N7 351 aaPredicted RBP9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 RSPH1Q8WYR4 309 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 DLG3Q92796 817 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 NRBF2Q96F24 287 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 SLC2A13Q96QE2 648 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 SMAD5Q99717 465 aaKnown RBP9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 NEURL2Q9BR09 285 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 RHNO1Q9BSD3 238 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 ZBED2Q9BTP6 218 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 C11orf84Q9BUA3 381 aaPredicted RBP9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 ABCC13Q9NSE7 274 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 TBC1D13Q9NVG8 400 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 RCOR3Q9P2K3 495 aaPredicted RBP9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 LRFN2Q9ULH4 789 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 NDUFAF1Q9Y375 327 aa9.88□□□□□ -0.83
CDC42SE1-202ENST00000439374 XIRP2A4UGR9 3374 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 MAGEB16A2A368 324 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 UBXN8O00124 270 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 IRAK2O43187 625 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 RAMP2O60895 175 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 ALDH1A2O94788 518 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 FTH1P02794 183 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 GSNP06396 782 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 AZGP1P25311 298 aaKnown RBP9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 HADHAP40939 763 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 KCNQ1P51787 676 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 DGKQP52824 942 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 GALNT2Q10471 571 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 RBBP7Q16576 425 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 AGAP9Q5VTM2 703 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 RSBN1Q5VWQ0 802 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 SPATC1Q76KD6 591 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 KDM1BQ8NB78 822 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 REXO4Q9GZR2 422 aaKnown RBP9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 PRDM5Q9NQX1 630 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 INTS7Q9NVH2 962 aaKnown RBP9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 MARCH4Q9P2E8 410 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 LIMD1Q9UGP4 676 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 SMIM30A4D0T7 59 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 MBLAC1A4D2B0 266 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 ENPP3O14638 875 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 ARPC2O15144 300 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 COPZ1P61923 177 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 TP53BP2Q13625 1128 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 UPP1Q16831 310 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 ZNF829Q3KNS6 432 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 FAM91A1Q658Y4 838 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 STEAP4Q687X5 459 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 ZYG11AQ6WRX3 759 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 TIFABQ6ZNK6 161 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 CARM1Q86X55 608 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 CROCCP3Q8IVE0 287 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 LZTR1Q8N653 840 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 PCYOX1LQ8NBM8 494 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 LPCAT1Q8NF37 534 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 CNIH3Q8TBE1 160 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 SPPL2BQ8TCT7 592 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 ANKRD49Q8WVL7 239 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 SNX19Q92543 992 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 RPL3LQ92901 407 aaKnown RBP9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 ACDQ96AP0 544 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 OLFM1Q99784 485 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 C17orf80Q9BSJ5 609 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 RIBC2Q9H4K1 309 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 AKTIPQ9H8T0 292 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 PLK2Q9NYY3 685 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 PCDHGC4Q9Y5F7 938 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 TRPC5OSA6NMA1 111 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 GPR39O43194 453 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 CABYRO75952 493 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 RECQL5O94762 991 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 GUCA1CO95843 209 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 CAPN3P20807 821 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 CCND3P30281 292 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 SLC7A1P30825 629 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 SHMT2P34897 504 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 NCS1P62166 190 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 BTG3Q14201 252 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 KCNJ8Q15842 424 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 ADRM1Q16186 407 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 COLEC12Q5KU26 742 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 LZICQ8WZA0 190 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 MTFMTQ96DP5 389 aaKnown RBP9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 CITED4Q96RK1 184 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 CHID1Q9BWS9 393 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 ZMYM5Q9UJ78 669 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 UTS2RQ9UKP6 389 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 TBC1D30Q9Y2I9 924 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 TCAF1Q9Y4C2 921 aa9.87□□□□□ -0.83
CDC42SE1-202ENST00000439374 TMEM221A6NGB7 291 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 GABRDO14764 452 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 FFAR3O14843 346 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 GPR42O15529 346 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 NDUFS3O75489 264 aa9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 PRKAR2AP13861 404 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-202ENST00000439374 MAGEA6P43360 314 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms