RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 GLYATL1Q969I3 302 aa13.37□□□□□ -0.27
GARNL3-206ENST00000439286 PMEPA1Q969W9 287 aa13.37□□□□□ -0.27
GARNL3-206ENST00000439286 RTP4Q96DX8 246 aa13.37□□□□□ -0.27
GARNL3-206ENST00000439286 IMP4Q96G21 291 aaKnown RBP13.37□□□□□ -0.27
GARNL3-206ENST00000439286 TTC25Q96NG3 672 aa13.37□□□□□ -0.27
GARNL3-206ENST00000439286 CTRCQ99895 268 aa13.37□□□□□ -0.27
GARNL3-206ENST00000439286 SLC12A9Q9BXP2 914 aa13.37□□□□□ -0.27
GARNL3-206ENST00000439286 ARFGAP3Q9NP61 516 aa13.37□□□□□ -0.27
GARNL3-206ENST00000439286 PRDM8Q9NQV8 689 aa13.37□□□□□ -0.27
GARNL3-206ENST00000439286 DDX56Q9NY93 547 aaKnown RBP13.37□□□□□ -0.27
GARNL3-206ENST00000439286 IL17BQ9UHF5 180 aa13.37□□□□□ -0.27
GARNL3-206ENST00000439286 NENFQ9UMX5 172 aa13.37□□□□□ -0.27
GARNL3-206ENST00000439286 SHROOM3Q8TF72 1996 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 PDZK1P1A8MUH7 402 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 VEGFDO43915 354 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 PIRTP0C851 137 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 TNNT1P13805 278 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 ITGB6P18564 788 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 XRCC1P18887 633 aaPredicted RBP13.36□□□□□ -0.27
GARNL3-206ENST00000439286 ARSDP51689 593 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 DCDC1P59894 354 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 DYNLT1P63172 113 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 FOXM1Q08050 763 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 ZNF648Q5T619 568 aaPredicted RBP13.36□□□□□ -0.27
GARNL3-206ENST00000439286 SLC9A4Q6AI14 798 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 CRTC3Q6UUV7 619 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 TMC3Q7Z5M5 1100 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 ADGRG6Q86SQ4 1221 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 RHOT1Q8IXI2 618 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 BMPERQ8N8U9 685 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 GPR26Q8NDV2 337 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 RNF25Q96BH1 459 aaPredicted RBP13.36□□□□□ -0.27
GARNL3-206ENST00000439286 SLC45A3Q96JT2 553 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 PLEKHG4BQ96PX9 1271 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 TBC1D10AQ9BXI6 508 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 CEP41Q9BYV8 373 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 UCK1Q9HA47 277 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 PILRAQ9UKJ1 303 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 ZNF711Q9Y462 761 aa13.36□□□□□ -0.27
GARNL3-206ENST00000439286 PCYT1BQ9Y5K3 369 aaPredicted RBP13.36□□□□□ -0.27
GARNL3-206ENST00000439286 A0A0A6YYK5 440 aaPredicted RBP13.35□□□□□ -0.27
GARNL3-206ENST00000439286 LILRA5A6NI73 299 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 SUV39H1O43463 412 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 STK17BO94768 372 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 UBXN7O94888 489 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 CDK14O94921 469 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 NDST3O95803 873 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 ZNF7P17097 686 aaPredicted RBP13.35□□□□□ -0.27
GARNL3-206ENST00000439286 IDSP22304 550 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 NR2C2P49116 596 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 POLE2P56282 527 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 NFKB2Q00653 900 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 ABHD18Q0P651 414 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 KCNAB2Q13303 367 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 CLCA4Q14CN2 919 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 SLC14A2Q15849 920 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 SEPT7Q16181 437 aaKnown RBP13.35□□□□□ -0.27
GARNL3-206ENST00000439286 PLA2G4EQ3MJ16 856 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 TEX44Q53QW1 395 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 LRRC38Q5VT99 294 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 ZDHHC20Q5W0Z9 365 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 ESX1Q8N693 406 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 BRSK1Q8TDC3 778 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 CXorf40BQ96DE9 158 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 TRIB3Q96RU7 358 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 DNAJC7Q99615 494 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 TRIM4Q9C037 500 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 NHEJ1Q9H9Q4 299 aaPredicted RBP13.35□□□□□ -0.27
GARNL3-206ENST00000439286 GLOD4Q9HC38 313 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 DNAJC16Q9Y2G8 782 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 PCDHB3Q9Y5E6 796 aa13.35□□□□□ -0.27
GARNL3-206ENST00000439286 COL27A1Q8IZC6 1860 aaPredicted RBP13.35□□□□□ -0.27
GARNL3-206ENST00000439286 A6NCN8 305 aa13.34□□□□□ -0.27
GARNL3-206ENST00000439286 SPOPO43791 374 aa13.34□□□□□ -0.27
GARNL3-206ENST00000439286 PMPCBO75439 489 aa13.34□□□□□ -0.27
GARNL3-206ENST00000439286 RASSF9O75901 435 aa13.34□□□□□ -0.27
GARNL3-206ENST00000439286 PRKAR1AP10644 381 aa13.34□□□□□ -0.27
GARNL3-206ENST00000439286 TYRP1P17643 537 aa13.34□□□□□ -0.27
GARNL3-206ENST00000439286 HALP42357 657 aa13.34□□□□□ -0.27
GARNL3-206ENST00000439286 UBE2IP63279 158 aaKnown RBP13.34□□□□□ -0.27
GARNL3-206ENST00000439286 SEPT6Q14141 434 aa13.34□□□□□ -0.27
GARNL3-206ENST00000439286 TFDP2Q14188 446 aa13.34□□□□□ -0.27
GARNL3-206ENST00000439286 ASTE1Q2TB18 679 aaPredicted RBP13.34□□□□□ -0.27
GARNL3-206ENST00000439286 CYB5D1Q6P9G0 228 aa13.34□□□□□ -0.27
GARNL3-206ENST00000439286 NPNTQ6UXI9 565 aa13.34□□□□□ -0.27
GARNL3-206ENST00000439286 TMEM26Q6ZUK4 368 aa13.34□□□□□ -0.27
GARNL3-206ENST00000439286 RBM12BQ8IXT5 1001 aaKnown RBP13.34□□□□□ -0.27
GARNL3-206ENST00000439286 SPATA22Q8NHS9 363 aa13.34□□□□□ -0.27
GARNL3-206ENST00000439286 TFB1MQ8WVM0 346 aaKnown RBP13.34□□□□□ -0.27
GARNL3-206ENST00000439286 EID2BQ96D98 161 aa13.34□□□□□ -0.27
GARNL3-206ENST00000439286 ZDHHC12Q96GR4 267 aa13.34□□□□□ -0.27
GARNL3-206ENST00000439286 C9orf72Q96LT7 481 aa13.34□□□□□ -0.27
GARNL3-206ENST00000439286 TGM7Q96PF1 710 aa13.34□□□□□ -0.27
GARNL3-206ENST00000439286 TIMM29Q9BSF4 260 aa13.34□□□□□ -0.27
GARNL3-206ENST00000439286 TRABDQ9H4I3 376 aa13.34□□□□□ -0.27
GARNL3-206ENST00000439286 POT1Q9NUX5 634 aa13.34□□□□□ -0.27
GARNL3-206ENST00000439286 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.34□□□□□ -0.27
GARNL3-206ENST00000439286 NFKBIL1Q9UBC1 381 aaPredicted RBP13.34□□□□□ -0.27
GARNL3-206ENST00000439286 FAM153AQ9UHL3 310 aa13.34□□□□□ -0.27
GARNL3-206ENST00000439286 TUBD1Q9UJT1 453 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms