RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 PCDHB7Q9Y5E2 793 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 MTMR11A4FU01 709 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 H0Y626 953 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 FFAR3O14843 346 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 GPR42O15529 346 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 TRIM16O95361 564 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 LDLRP01130 860 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 CNPP09543 421 aaKnown RBP16.6■□□□□ 0.25
TTC3-209ENST00000438055 PAX3P23760 479 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 CA8P35219 290 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 POLR2JP52435 117 aaKnown RBP16.6■□□□□ 0.25
TTC3-209ENST00000438055 RNF219Q5W0B1 726 aaPredicted RBP16.6■□□□□ 0.25
TTC3-209ENST00000438055 KANK2Q63ZY3 851 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 ZNF598Q86UK7 904 aaKnown RBP16.6■□□□□ 0.25
TTC3-209ENST00000438055 CLEC4FQ8N1N0 589 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 CARNMT1Q8N4J0 409 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 CCM2LQ9NUG4 571 aaPredicted RBP16.6■□□□□ 0.25
TTC3-209ENST00000438055 INTS7Q9NVH2 962 aaKnown RBP16.6■□□□□ 0.25
TTC3-209ENST00000438055 DNMT3LQ9UJW3 386 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 ABT1Q9ULW3 272 aaKnown RBP16.6■□□□□ 0.25
TTC3-209ENST00000438055 PKP3Q9Y446 797 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 HEMK1Q9Y5R4 338 aaPredicted RBP16.6■□□□□ 0.25
TTC3-209ENST00000438055 GNGT2O14610 69 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 GJB5O95377 273 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 ATP4BP51164 291 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 NEDD8Q15843 81 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 PAGE3Q5JUK9 113 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 RNF180Q86T96 592 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 DHRSXQ8N5I4 330 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 OR52B6Q8NGF0 335 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 RHEBL1Q8TAI7 183 aa16.6■□□□□ 0.25
TTC3-209ENST00000438055 AFF4Q9UHB7 1163 aaKnown RBP16.6■□□□□ 0.25
TTC3-209ENST00000438055 LEF1Q9UJU2 399 aaPredicted RBP16.6■□□□□ 0.25
TTC3-209ENST00000438055 LCHNA4D1U4 455 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 CKBP12277 381 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 SLC2A7Q6PXP3 512 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 CMTR2Q8IYT2 770 aaKnown RBP16.59■□□□□ 0.25
TTC3-209ENST00000438055 STON2Q8WXE9 905 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 EZH1Q92800 747 aaPredicted RBP16.59■□□□□ 0.25
TTC3-209ENST00000438055 FUBP1Q96AE4 644 aaKnown RBP16.59■□□□□ 0.25
TTC3-209ENST00000438055 NSMCE2Q96MF7 247 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 C17orf80Q9BSJ5 609 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 THUMPD3Q9BV44 507 aaKnown RBP16.59■□□□□ 0.25
TTC3-209ENST00000438055 ADGRE3Q9BY15 652 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 DERL2Q9GZP9 239 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 SDR39U1Q9NRG7 319 aaPredicted RBP16.59■□□□□ 0.25
TTC3-209ENST00000438055 INTS10Q9NVR2 710 aaKnown RBP16.59■□□□□ 0.25
TTC3-209ENST00000438055 RHBDL2Q9NX52 303 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 CROCCQ5TZA2 2017 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 AQP12BA6NM10 295 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 SNAP91O60641 907 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 VPS4BO75351 444 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 MLYCDO95822 493 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 SLC6A4P31645 630 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 YAP1P46937 504 aaKnown RBP16.59■□□□□ 0.25
TTC3-209ENST00000438055 MTPNP58546 118 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 AASDHQ4L235 1098 aaPredicted RBP16.59■□□□□ 0.25
TTC3-209ENST00000438055 RGMBQ6NW40 437 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 BLOC1S3Q6QNY0 202 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 AQP12AQ8IXF9 295 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 ZNF683Q8IZ20 524 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 MDGA1Q8NFP4 955 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 CENPNQ96H22 339 aaPredicted RBP16.59■□□□□ 0.25
TTC3-209ENST00000438055 LATS2Q9NRM7 1088 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 ACTR3BQ9P1U1 418 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 ATXN10Q9UBB4 475 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.59■□□□□ 0.25
TTC3-209ENST00000438055 CNOT11Q9UKZ1 510 aaKnown RBP16.59■□□□□ 0.25
TTC3-209ENST00000438055 FADS3Q9Y5Q0 445 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 TSC2P49815 1807 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 A0A087WXM4 84 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 A0A1W2PP18 115 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 H3BNH8 94 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 EPOP01588 193 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 CAPN1P07384 714 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 FGF4P08620 206 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 SLC2A4P14672 509 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 SLC5A2P31639 672 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 TTPAP49638 278 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 NFKB2Q00653 900 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 MERTKQ12866 999 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 PRKG2Q13237 762 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 C18orf21Q32NC0 220 aaPredicted RBP16.59■□□□□ 0.25
TTC3-209ENST00000438055 PLA2G4EQ3MJ16 856 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 TMEM214Q6NUQ4 689 aaKnown RBP16.59■□□□□ 0.25
TTC3-209ENST00000438055 HACD2Q6Y1H2 254 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 EFL1Q7Z2Z2 1120 aaKnown RBP16.59■□□□□ 0.25
TTC3-209ENST00000438055 FIBCD1Q8N539 461 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 NUDT8Q8WV74 236 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 NCLNQ969V3 563 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 MAGEH1Q9H213 219 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 VPS9D1Q9Y2B5 631 aa16.59■□□□□ 0.25
TTC3-209ENST00000438055 NOL3O60936 208 aaKnown RBP16.58■□□□□ 0.25
TTC3-209ENST00000438055 UROSP10746 265 aa16.58■□□□□ 0.25
TTC3-209ENST00000438055 PIM1P11309 404 aaPredicted RBP16.58■□□□□ 0.25
TTC3-209ENST00000438055 CDH2P19022 906 aaPredicted RBP16.58■□□□□ 0.25
TTC3-209ENST00000438055 DGKQP52824 942 aa16.58■□□□□ 0.25
TTC3-209ENST00000438055 RHOAP61586 193 aa16.58■□□□□ 0.25
TTC3-209ENST00000438055 PPP4R4Q6NUP7 873 aa16.58■□□□□ 0.25
TTC3-209ENST00000438055 CHST15Q7LFX5 561 aaPredicted RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms