RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 ACSL5Q9ULC5 683 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 LSM4Q9Y4Z0 139 aaKnown RBP2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 EPRSP07814 1512 aaKnown RBP2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 STRCQ7RTU9 1775 aa2.97□□□□□ -1.93
HMGB1P31-201ENST00000437242 PTPRMP28827 1452 aa2.96□□□□□ -1.93
HMGB1P31-201ENST00000437242 A6NLC8 198 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 SH2B2O14492 632 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 TCERG1O14776 1098 aaKnown RBP2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 CTSVO60911 334 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 HNRNPA1P09651 372 aaKnown RBP eCLIP2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 DPEP1P16444 411 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 ELF1P32519 619 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 HSPA2P54652 639 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 FOXM1Q08050 763 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 DDX10Q13206 875 aaKnown RBP2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 CAMK1Q14012 370 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 TMEM187Q14656 261 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 PPP2R5BQ15173 497 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 GPR68Q15743 365 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 HIST2H2ACQ16777 129 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 C2orf68Q2NKX9 166 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 TECRLQ5HYJ1 363 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 CPLX2Q6PUV4 134 aaKnown RBP2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 ZNF704Q6ZNC4 412 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 TDRPQ86YL5 185 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 DHX40Q8IX18 779 aaKnown RBP2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 ZNF473Q8WTR7 871 aaKnown RBP2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 FCAMRQ8WWV6 532 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 ST8SIA4Q92187 359 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 ORAI1Q96D31 301 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 HVCN1Q96D96 273 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 TRIM51Q9BSJ1 452 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 FUZQ9BT04 418 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 PHF7Q9BWX1 381 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 SLC26A6Q9BXS9 759 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 ZHX3Q9H4I2 956 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 RPS10P5Q9NQ39 176 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 C2orf42Q9NWW7 574 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 HCN3Q9P1Z3 774 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 HSF4Q9ULV5 492 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 ERVK-11Q9UQG0 969 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 MRPS28Q9Y2Q9 187 aaKnown RBP2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 TOP2BQ02880 1626 aa2.96□□□□□ -1.94
HMGB1P31-201ENST00000437242 NOTCH2Q04721 2471 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 ERICH3Q5RHP9 1530 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 WDHD1O75717 1129 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 SORBS2O94875 1100 aaKnown RBP2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 TMEM63AO94886 807 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 CD48P09326 243 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 SHMT1P34896 483 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 KRT9P35527 623 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 AHRP35869 848 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 CSNK2A1P68400 391 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 MRPS5P82675 430 aaKnown RBP2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 MPP1Q00013 466 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 SORDQ00796 357 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 PLIN5Q00G26 463 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 ZC2HC1CQ53FD0 456 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 INO80CQ6PI98 192 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 RAD9BQ6WBX8 426 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 SLC46A3Q7Z3Q1 461 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 HEATR4Q86WZ0 1026 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 ARMC8Q8IUR7 673 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 C11orf65Q8NCR3 313 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 CSNK2A3Q8NEV1 391 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 TNIP2Q8NFZ5 429 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 FGFBP3Q8TAT2 258 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 RUFY2Q8WXA3 655 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 RFFLQ8WZ73 363 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 ARHGEF26Q96DR7 871 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 RNF125Q96EQ8 232 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 POM121L2Q96KW2 1035 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 VGLL1Q99990 258 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 AGXT2Q9BYV1 514 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 PREBQ9HCU5 417 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 SLC25A10Q9UBX3 287 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 CACNG5Q9UF02 275 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 RASAL2Q9UJF2 1139 aa2.95□□□□□ -1.94
HMGB1P31-201ENST00000437242 DISP1Q96F81 1524 aa2.94□□□□□ -1.94
HMGB1P31-201ENST00000437242 ZCWPW2A0A1B0GU75 182 aa2.94□□□□□ -1.94
HMGB1P31-201ENST00000437242 A0A1W2PNU3 283 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P31-201ENST00000437242 F5H0A9 414 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P31-201ENST00000437242 H7C423 109 aa2.94□□□□□ -1.94
HMGB1P31-201ENST00000437242 EIF3DO15371 548 aaKnown RBP eCLIP2.94□□□□□ -1.94
HMGB1P31-201ENST00000437242 SPINT2O43291 252 aa2.94□□□□□ -1.94
HMGB1P31-201ENST00000437242 MBD4O95243 580 aa2.94□□□□□ -1.94
HMGB1P31-201ENST00000437242 EGFP01133 1207 aa2.94□□□□□ -1.94
HMGB1P31-201ENST00000437242 TFP02787 698 aa2.94□□□□□ -1.94
HMGB1P31-201ENST00000437242 GALTP07902 379 aa2.94□□□□□ -1.94
HMGB1P31-201ENST00000437242 ZNF23P17027 643 aa2.94□□□□□ -1.94
HMGB1P31-201ENST00000437242 MAP2K2P36507 400 aa2.94□□□□□ -1.94
HMGB1P31-201ENST00000437242 TUBP50607 506 aa2.94□□□□□ -1.94
HMGB1P31-201ENST00000437242 TAS2R38P59533 333 aa2.94□□□□□ -1.94
HMGB1P31-201ENST00000437242 KRTAP12-2P59991 146 aa2.94□□□□□ -1.94
HMGB1P31-201ENST00000437242 RPP30P78346 268 aaKnown RBP2.94□□□□□ -1.94
HMGB1P31-201ENST00000437242 EFNB1P98172 346 aa2.94□□□□□ -1.94
HMGB1P31-201ENST00000437242 GALNT2Q10471 571 aa2.94□□□□□ -1.94
HMGB1P31-201ENST00000437242 G3BP1Q13283 466 aaKnown RBP eCLIP2.94□□□□□ -1.94
HMGB1P31-201ENST00000437242 NAE1Q13564 534 aa2.94□□□□□ -1.94
HMGB1P31-201ENST00000437242 RALBP1Q15311 655 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms