RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 OR3A3P47888 321 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 OR3A2P47893 321 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 CRHR2Q13324 411 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 SNAPC1Q16533 368 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 DCST1Q5T197 706 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 UNQ6126/PRO20091Q6UXV3 157 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 UNC5AQ6ZN44 842 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 OTOP1Q7RTM1 612 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 ACDQ96AP0 544 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 CCDC115Q96NT0 180 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 FUT8Q9BYC5 575 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 C8orf4Q9NR00 106 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 RAPGEFL1Q9UHV5 662 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 SPHKAPQ2M3C7 1700 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 TRBV23OR9-2A0A075B6M9 112 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 DDTLA6NHG4 134 aaPredicted RBP11.13□□□□□ -0.63
SCN4A-201ENST00000435607 METTL18O95568 372 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 ASLP04424 464 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 CCNFP41002 786 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 EIF5AP63241 154 aaKnown RBP11.13□□□□□ -0.63
SCN4A-201ENST00000435607 LDLRAP1Q5SW96 308 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 SCGB3A2Q96PL1 93 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 ZNF670Q9BS34 389 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 ANKHQ9HCJ1 492 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 PCDHB16Q9NRJ7 776 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 DNAAF2Q9NVR5 837 aaKnown RBP11.13□□□□□ -0.63
SCN4A-201ENST00000435607 MIOSQ9NXC5 875 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 LRCH1Q9Y2L9 728 aa11.13□□□□□ -0.63
SCN4A-201ENST00000435607 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 SEPT4O43236 478 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 IL33O95760 270 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 GJA1P17302 382 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 HSD11B1P28845 292 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 SDC2P34741 201 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 RPS9P46781 194 aaKnown RBP11.12□□□□□ -0.63
SCN4A-201ENST00000435607 GCNT6Q5T4J0 391 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 SPESP1Q6UW49 350 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 LRRC70Q7Z2Q7 622 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 CAND1Q86VP6 1230 aaKnown RBP11.12□□□□□ -0.63
SCN4A-201ENST00000435607 KIAA0319LQ8IZA0 1049 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 PPP1R13LQ8WUF5 828 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 ZSWIM3Q96MP5 696 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 ZNF639Q9UID6 485 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 OR14I1A6ND48 311 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 PDCD5O14737 125 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 SLC31A1O15431 190 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 TRAPPC6AO75865 159 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 UGT2B4P06133 528 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 GSTT2BP0CG30 244 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 FGFR3P22607 806 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 DNAJA1P31689 397 aaKnown RBP11.12□□□□□ -0.63
SCN4A-201ENST00000435607 HTR7P34969 479 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 SCTRP47872 440 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 ARCN1P48444 511 aaKnown RBP11.12□□□□□ -0.63
SCN4A-201ENST00000435607 DUSP3P51452 185 aaPredicted RBP11.12□□□□□ -0.63
SCN4A-201ENST00000435607 PGDP52209 483 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 ZNF311Q5JNZ3 666 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 DENND5AQ6IQ26 1287 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 ANKS1BQ7Z6G8 1248 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 FBXO25Q8TCJ0 367 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 BRSK1Q8TDC3 778 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 ABHD5Q8WTS1 349 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 TNFAIP8L1Q8WVP5 186 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 LPPQ93052 612 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 SLC38A4Q969I6 547 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 TBC1D10AQ9BXI6 508 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 TRMT13Q9NUP7 481 aaKnown RBP11.12□□□□□ -0.63
SCN4A-201ENST00000435607 TMEM5Q9Y2B1 443 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 DUSP10Q9Y6W6 482 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 SMIM35A0A1B0GVV1 85 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 PLK4O00444 970 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 AHCYP23526 432 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 SSTR1P30872 391 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 SP140Q13342 867 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 TNFAIP8L3Q5GJ75 292 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 LIPMQ5VYY2 423 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 SATL1Q86VE3 508 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 MAP4K3Q8IVH8 894 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 C12orf56Q8IXR9 622 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 ZCCHC9Q8N567 271 aaKnown RBP11.12□□□□□ -0.63
SCN4A-201ENST00000435607 NXPE2Q96DL1 559 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 OSGEPQ9NPF4 335 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 RIPK2O43353 540 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 OR1F1O43749 312 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 IL12AP29459 219 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 GRIA4P48058 902 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 ABATP80404 500 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 CCZ1BP86790 482 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 CCZ1P86791 482 aaPredicted RBP11.12□□□□□ -0.63
SCN4A-201ENST00000435607 MC1RQ01726 317 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 ST3GAL4Q11206 333 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 CRY2Q49AN0 593 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 WDR45BQ5MNZ6 344 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 SHC3Q92529 594 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 DCUN1D5Q9BTE7 237 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 RPL22P35268 128 aaKnown RBP11.12□□□□□ -0.63
SCN4A-201ENST00000435607 FAM183BPQ6ZVS7 135 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 ZNF615Q8N8J6 731 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 PLA2G15Q8NCC3 412 aa11.12□□□□□ -0.63
SCN4A-201ENST00000435607 BORCS8Q96FH0 119 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms