RNA–Protein interactions for RNA: ENST00000434585.5

RAB11FIP3-203, Transcript of RAB11 family interacting protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene RAB11FIP3, Length 3,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-203ENST00000434585 NTRK1P04629 796 aa12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 UGT2B4P06133 528 aa12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 CSKP41240 450 aa12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 HALP42357 657 aa12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 LEPRP48357 1165 aaKnown RBP12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 RPL34P49207 117 aaKnown RBP12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 TUFMP49411 452 aaKnown RBP12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 NEK2P51955 445 aa12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 STC1P52823 247 aa12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 IHHQ14623 411 aa12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 AAK1Q2M2I8 961 aa12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 USP41Q3LFD5 358 aa12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 ZFP1Q6P2D0 407 aa12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 AFTPHQ6ULP2 937 aa12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 DDX53Q86TM3 631 aaKnown RBP12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 KBTBD6Q86V97 674 aa12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 TTC30BQ8N4P2 665 aa12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 ARRDC2Q8TBH0 407 aa12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 WBP2Q969T9 261 aa12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 RMND5BQ96G75 393 aaPredicted RBP12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 SLC22A12Q96S37 553 aa12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 TSPAN18Q96SJ8 248 aa12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 SH3GL3Q99963 347 aa12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 IPPKQ9H8X2 491 aa12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 MRPL40Q9NQ50 206 aaKnown RBP12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 Q9Y3F1 56 aa12.16□□□□□ -0.46
RAB11FIP3-203ENST00000434585 TNFAIP8O95379 198 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 IL1BP01584 269 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 GALTP07902 379 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 CD1DP15813 335 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 ITGALP20701 1170 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 STK19P49842 368 aaPredicted RBP12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 HTR6P50406 440 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 LIPEQ05469 1076 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 LCP2Q13094 533 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 LAPTM5Q13571 262 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 LAPTM4AQ15012 233 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 NADK2Q4G0N4 442 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 PIGGQ5H8A4 983 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 C2orf73Q8N5S3 287 aaPredicted RBP12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 TSPAN14Q8NG11 270 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 MED8Q96G25 268 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 NSMCE2Q96MF7 247 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 BBS2Q9BXC9 721 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 RNF38Q9H0F5 515 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 GSTO2Q9H4Y5 243 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 POLG2Q9UHN1 485 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 LSM7Q9UK45 103 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 OR6C75A6NL08 312 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 ANKRD66B4E2M5 251 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 AGRPO00253 132 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 PRAMEF11O60813 436 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 ZNF189O75820 626 aaPredicted RBP12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 FKBP9O95302 570 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 YBEYP58557 167 aaPredicted RBP12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 PTGR1Q14914 329 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 FKBP9P1Q75LS8 142 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 LPCAT2Q7L5N7 544 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 MRPL10Q7Z7H8 261 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 SLC22A15Q8IZD6 547 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 ZNF483Q8TF39 744 aaPredicted RBP12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 MRPS31Q92665 395 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 AURKBQ96GD4 344 aaPredicted RBP12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 FUBP3Q96I24 572 aaKnown RBP eCLIP12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 GPR78Q96P69 363 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 EXD2Q9NVH0 621 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 INTS7Q9NVH2 962 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 TMEM161AQ9NX61 479 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 CFAP97Q9P2B7 532 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 OAZ3Q9UMX2 235 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 BRCA1P38398 1863 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 SLC22A3O75751 556 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 ZBTB11O95625 1053 aaPredicted RBP12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 ALDOCP09972 364 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 CAPN3P20807 821 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 PPM1FP49593 454 aaPredicted RBP12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 GSTA3Q16772 222 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 OR52E8Q6IFG1 317 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 SERPINA9Q86WD7 417 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 LRRC49Q8IUZ0 686 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 MDGA1Q8NFP4 955 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 PTCD2Q8WV60 388 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 GATA6Q92908 595 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 AARSD1Q9BTE6 412 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 ZDHHC4Q9NPG8 344 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 CNOT6Q9ULM6 557 aaKnown RBP12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 ATG2BQ96BY7 2078 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 MYO10Q9HD67 2058 aa12.15□□□□□ -0.46
RAB11FIP3-203ENST00000434585 OR2AG2A6NM03 316 aa12.14□□□□□ -0.47
RAB11FIP3-203ENST00000434585 H3BSA7 217 aa12.14□□□□□ -0.47
RAB11FIP3-203ENST00000434585 PRAMEF12O95522 483 aa12.14□□□□□ -0.47
RAB11FIP3-203ENST00000434585 EOMESO95936 686 aa12.14□□□□□ -0.47
RAB11FIP3-203ENST00000434585 HIST1H2AGP0C0S8 130 aaPredicted RBP12.14□□□□□ -0.47
RAB11FIP3-203ENST00000434585 HIST1H2ADP20671 130 aa12.14□□□□□ -0.47
RAB11FIP3-203ENST00000434585 ADRA1AP35348 466 aa12.14□□□□□ -0.47
RAB11FIP3-203ENST00000434585 TTPAP49638 278 aa12.14□□□□□ -0.47
RAB11FIP3-203ENST00000434585 ARMC3Q5W041 872 aa12.14□□□□□ -0.47
RAB11FIP3-203ENST00000434585 SLC44A2Q8IWA5 706 aaPredicted RBP12.14□□□□□ -0.47
RAB11FIP3-203ENST00000434585 HIST1H2AHQ96KK5 128 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms