RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 GPIP06744 558 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 PRSS56P0CW18 603 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 UMPSP11172 480 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 CHRM3P20309 590 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 PSMA4P25789 261 aaKnown RBP10.33□□□□□ -0.76
CD44-210ENST00000434472 GRIA3P42263 894 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 NR1H2P55055 460 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 EEFSECP57772 596 aaKnown RBP10.33□□□□□ -0.76
CD44-210ENST00000434472 ERVK-8P63133 956 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 TRAF2Q12933 501 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 NFYCQ13952 458 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 VEPH1Q14D04 833 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 RBBP5Q15291 538 aaKnown RBP10.33□□□□□ -0.76
CD44-210ENST00000434472 VPS26BQ4G0F5 336 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 AASDHQ4L235 1098 aaPredicted RBP10.33□□□□□ -0.76
CD44-210ENST00000434472 INTS11Q5TA45 600 aaKnown RBP10.33□□□□□ -0.76
CD44-210ENST00000434472 TPGS2Q68CL5 300 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 PSAPL1Q6NUJ1 521 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 PPP4R4Q6NUP7 873 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 CYP2R1Q6VVX0 501 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 TAS2R42Q7RTR8 314 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 TAS1R1Q7RTX1 841 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 SYVN1Q86TM6 617 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 SPNS2Q8IVW8 549 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 ALDH16A1Q8IZ83 802 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 EFHBQ8N7U6 833 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 CD200R1Q8TD46 325 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 PPWD1Q96BP3 646 aaKnown RBP10.33□□□□□ -0.76
CD44-210ENST00000434472 TRMT2BQ96GJ1 504 aaKnown RBP10.33□□□□□ -0.76
CD44-210ENST00000434472 SLC45A3Q96JT2 553 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 KCNA7Q96RP8 456 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 ZNF382Q96SR6 550 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 BRINP2Q9C0B6 783 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 HMX1Q9NP08 348 aaPredicted RBP10.33□□□□□ -0.76
CD44-210ENST00000434472 STOML2Q9UJZ1 356 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 PKP3Q9Y446 797 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 PCDHGC4Q9Y5F7 938 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 ACTL7AQ9Y615 435 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 SLC30A1Q9Y6M5 507 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 CHD5Q8TDI0 1954 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 DHRS12A0PJE2 317 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 ARHGAP10A1A4S6 786 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 CCDC154A6NI56 674 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 NT5C1B-RDH14C9J2C7 533 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 PITPNM1O00562 1244 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 AKAP10O43572 662 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 TSPAN3O60637 253 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 SLC22A3O75751 556 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 TMCC1O94876 653 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 TSPAN12O95859 305 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 GNRH1P01148 92 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 TFAP2AP05549 437 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 C7P10643 843 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 HMGA1P17096 107 aaKnown RBP10.33□□□□□ -0.76
CD44-210ENST00000434472 ATP6V1B2P21281 511 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 RPS3P23396 243 aaKnown RBP eCLIP10.33□□□□□ -0.76
CD44-210ENST00000434472 FASP25445 335 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 OR1D2P34982 312 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 NME5P56597 212 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 RHOAP61586 193 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 AP1S1P61966 158 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 LSAMPQ13449 338 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 APOFQ13790 326 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 PCBP2Q15366 365 aaKnown RBP eCLIP10.33□□□□□ -0.76
CD44-210ENST00000434472 MTX3Q5HYI7 312 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 CTSL3PQ5NE16 218 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 TBCELQ5QJ74 424 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 LYPLAL1Q5VWZ2 237 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 LHX8Q68G74 356 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 CXorf57Q6NSI4 855 aaKnown RBP10.33□□□□□ -0.76
CD44-210ENST00000434472 HMBOX1Q6NT76 420 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 BORAQ6PGQ7 559 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 ZBTB49Q6ZSB9 765 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 ADAMTSL2Q86TH1 951 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 SATL1Q86VE3 508 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 CAMK1DQ8IU85 385 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 GALNT13Q8IUC8 556 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 SNX31Q8N9S9 440 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 MFSD2AQ8NA29 543 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 SIDT2Q8NBJ9 832 aaKnown RBP10.33□□□□□ -0.76
CD44-210ENST00000434472 HJURPQ8NCD3 748 aaPredicted RBP10.33□□□□□ -0.76
CD44-210ENST00000434472 EXOC2Q96KP1 924 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 NSMCE3Q96MG7 304 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 C9orf16Q9BUW7 83 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 P2RY12Q9H244 342 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 SEMA6AQ9H2E6 1030 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 IL1RL2Q9HB29 575 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 MAGEE1Q9HCI5 957 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 SLC52A3Q9NQ40 469 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 PNPLA3Q9NST1 481 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 CMTM6Q9NX76 183 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 PTTG2Q9NZH5 202 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 LHX3Q9UBR4 397 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 APPL1Q9UKG1 709 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 IKZF3Q9UKT9 509 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 DMTF1Q9Y222 760 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 DHRS7Q9Y394 339 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 ZNF711Q9Y462 761 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 PCDHA9Q9Y5H5 950 aa10.33□□□□□ -0.76
CD44-210ENST00000434472 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms