RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 PCYOX1Q9UHG3 505 aa18.16■□□□□ 0.5
HLA-F-220ENST00000434407 ZNHIT2Q9UHR6 403 aa18.16■□□□□ 0.5
HLA-F-220ENST00000434407 PLEKHM1Q9Y4G2 1056 aa18.16■□□□□ 0.5
HLA-F-220ENST00000434407 GPSM3Q9Y4H4 160 aa18.16■□□□□ 0.5
HLA-F-220ENST00000434407 GRID2O43424 1007 aa18.15■□□□□ 0.5
HLA-F-220ENST00000434407 MTX2O75431 263 aa18.15■□□□□ 0.5
HLA-F-220ENST00000434407 TOP3BO95985 862 aaKnown RBP18.15■□□□□ 0.5
HLA-F-220ENST00000434407 RPIAP49247 311 aa18.15■□□□□ 0.5
HLA-F-220ENST00000434407 CLCNKAP51800 687 aa18.15■□□□□ 0.5
HLA-F-220ENST00000434407 TMEM115Q12893 351 aaPredicted RBP18.15■□□□□ 0.5
HLA-F-220ENST00000434407 FOXC1Q12948 553 aa18.15■□□□□ 0.5
HLA-F-220ENST00000434407 GPS1Q13098 491 aa18.15■□□□□ 0.5
HLA-F-220ENST00000434407 LAMB3Q13751 1172 aa18.15■□□□□ 0.5
HLA-F-220ENST00000434407 SMAD1Q15797 465 aaKnown RBP18.15■□□□□ 0.5
HLA-F-220ENST00000434407 KCTD19Q17RG1 926 aaPredicted RBP18.15■□□□□ 0.5
HLA-F-220ENST00000434407 GPRC6AQ5T6X5 926 aa18.15■□□□□ 0.5
HLA-F-220ENST00000434407 ZNF534Q76KX8 674 aa18.15■□□□□ 0.5
HLA-F-220ENST00000434407 CHCHD4Q8N4Q1 142 aa18.15■□□□□ 0.5
HLA-F-220ENST00000434407 KYQ8NBH2 561 aa18.15■□□□□ 0.5
HLA-F-220ENST00000434407 CDKN2AIPNLQ96HQ2 116 aa18.15■□□□□ 0.5
HLA-F-220ENST00000434407 SUDS3Q9H7L9 328 aaPredicted RBP18.15■□□□□ 0.5
HLA-F-220ENST00000434407 PADI4Q9UM07 663 aa18.15■□□□□ 0.5
HLA-F-220ENST00000434407 COL27A1Q8IZC6 1860 aaPredicted RBP18.15■□□□□ 0.5
HLA-F-220ENST00000434407 TRBV5-4A0A0C4DH59 114 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 TCRBV7S3A2A0A539 114 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 HEATR9A2RTY3 570 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 PRR19A6NJB7 356 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 AP3B1O00203 1094 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 HYAL3O43820 417 aaPredicted RBP18.14■□□□□ 0.49
HLA-F-220ENST00000434407 CDK14O94921 469 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 GAS8O95995 478 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 ADRA1DP25100 572 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 E2F1Q01094 437 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 ACVR1Q04771 509 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 SEPT6Q14141 434 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 SKIDA1Q1XH10 827 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 GUSBP11Q6P575 273 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 LRRC8BQ6P9F7 803 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 DHRS13Q6UX07 377 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 TMPRSS7Q7RTY8 843 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 SNX20Q7Z614 316 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 ZNF547Q8IVP9 402 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 OR6C4Q8NGE1 309 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 CPT1BQ92523 772 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 PEX13Q92968 403 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 NAT6Q93015 286 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 CAPZA3Q96KX2 299 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 DDX47Q9H0S4 455 aaKnown RBP18.14■□□□□ 0.49
HLA-F-220ENST00000434407 ASB8Q9H765 288 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 PRKAB1Q9Y478 270 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 TCAF1Q9Y4C2 921 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 FRYQ5TBA9 3013 aa18.14■□□□□ 0.49
HLA-F-220ENST00000434407 KMOO15229 486 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 ECEL1O95672 775 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 ACTR1BP42025 376 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 NPY2RP49146 381 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 VPS41P49754 854 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 ARSDP51689 593 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 ACTR1AP61163 376 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 TMPRSS15P98073 1019 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 HLTFQ14527 1009 aaKnown RBP eCLIP18.13■□□□□ 0.49
HLA-F-220ENST00000434407 GPR33Q49SQ1 333 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 CCDC38Q502W7 563 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 TSTD2Q5T7W7 516 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 SLC30A9Q6PML9 568 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 NLRP9Q7RTR0 991 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 C11orf96Q7Z7L8 435 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 LRRTM4Q86VH4 590 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 SFTPA2Q8IWL1 248 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 CACTIN-AS1Q8N1I8 211 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 OR13J1Q8NGT2 312 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 IFI44Q8TCB0 444 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 ZDHHC1Q8WTX9 485 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 ULK4Q96C45 1275 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 SCNM1Q9BWG6 230 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 ZCCHC2Q9C0B9 1178 aaKnown RBP18.13■□□□□ 0.49
HLA-F-220ENST00000434407 DPEP2Q9H4A9 486 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 SIRPGQ9P1W8 387 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 GULP1Q9UBP9 304 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 ANGPTL2Q9UKU9 493 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 NEUROG3Q9Y4Z2 214 aa18.13■□□□□ 0.49
HLA-F-220ENST00000434407 IGLV3-16A0A075B6K0 115 aa18.12■□□□□ 0.49
HLA-F-220ENST00000434407 CCL22O00626 93 aa18.12■□□□□ 0.49
HLA-F-220ENST00000434407 ITGALP20701 1170 aa18.12■□□□□ 0.49
HLA-F-220ENST00000434407 MC4RP32245 332 aa18.12■□□□□ 0.49
HLA-F-220ENST00000434407 PTGIRP43119 386 aa18.12■□□□□ 0.49
HLA-F-220ENST00000434407 C14orf28Q4W4Y0 310 aa18.12■□□□□ 0.49
HLA-F-220ENST00000434407 PERM1Q5SV97 790 aa18.12■□□□□ 0.49
HLA-F-220ENST00000434407 ANKRD22Q5VYY1 191 aa18.12■□□□□ 0.49
HLA-F-220ENST00000434407 ARMC3Q5W041 872 aa18.12■□□□□ 0.49
HLA-F-220ENST00000434407 CHST15Q7LFX5 561 aaPredicted RBP18.12■□□□□ 0.49
HLA-F-220ENST00000434407 EFL1Q7Z2Z2 1120 aaKnown RBP18.12■□□□□ 0.49
HLA-F-220ENST00000434407 TMPRSS12Q86WS5 348 aa18.12■□□□□ 0.49
HLA-F-220ENST00000434407 NAGSQ8N159 534 aa18.12■□□□□ 0.49
HLA-F-220ENST00000434407 NXPE1Q8N323 547 aa18.12■□□□□ 0.49
HLA-F-220ENST00000434407 RASGEF1AQ8N9B8 481 aa18.12■□□□□ 0.49
HLA-F-220ENST00000434407 MCUQ8NE86 351 aa18.12■□□□□ 0.49
HLA-F-220ENST00000434407 GDAP1Q8TB36 358 aa18.12■□□□□ 0.49
HLA-F-220ENST00000434407 SGSM3Q96HU1 749 aa18.12■□□□□ 0.49
HLA-F-220ENST00000434407 ZNF778Q96MU6 729 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms