RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 UGT1A3P35503 534 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 UGT1A5P35504 534 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 TAS2R38P59533 333 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 CBX1P83916 185 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 CRY1Q16526 586 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 ATP13A5Q4VNC0 1218 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 USP30Q70CQ3 517 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 RAPH1Q70E73 1250 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 KBTBD6Q86V97 674 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 NLRP8Q86W28 1048 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 ANKRD42Q8N9B4 389 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 TCP10LQ8TDR4 215 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 CENPTQ96BT3 561 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 BIRC8Q96P09 236 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 SLC13A1Q9BZW2 595 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 P2RY12Q9H244 342 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 VPS11Q9H270 941 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 POPDC3Q9HBV1 291 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 FBXL12Q9NXK8 326 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 SERGEFQ9UGK8 458 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 FZD4Q9ULV1 537 aa18.08■□□□□ 0.48
HMGN1-206ENST00000431390 A0A087X1B8 175 aa18.07■□□□□ 0.48
HMGN1-206ENST00000431390 KANSL1LA0AUZ9 987 aa18.07■□□□□ 0.48
HMGN1-206ENST00000431390 LZTS3O60299 673 aaPredicted RBP18.07■□□□□ 0.48
HMGN1-206ENST00000431390 SLC35E2BP0CK96 405 aa18.07■□□□□ 0.48
HMGN1-206ENST00000431390 COL6A2P12110 1019 aa18.07■□□□□ 0.48
HMGN1-206ENST00000431390 PKMP14618 531 aaKnown RBP18.07■□□□□ 0.48
HMGN1-206ENST00000431390 SAT1P21673 171 aa18.07■□□□□ 0.48
HMGN1-206ENST00000431390 TARSP26639 723 aaKnown RBP18.07■□□□□ 0.48
HMGN1-206ENST00000431390 FMO4P31512 558 aa18.07■□□□□ 0.48
HMGN1-206ENST00000431390 PUM1Q14671 1186 aaKnown RBP eCLIP18.07■□□□□ 0.481e-6■□□□□ 9.6
HMGN1-206ENST00000431390 PPM1JQ5JR12 505 aa18.07■□□□□ 0.48
HMGN1-206ENST00000431390 CLEC14AQ86T13 490 aa18.07■□□□□ 0.48
HMGN1-206ENST00000431390 CEP97Q8IW35 865 aa18.07■□□□□ 0.48
HMGN1-206ENST00000431390 MAML2Q8IZL2 1156 aaPredicted RBP18.07■□□□□ 0.48
HMGN1-206ENST00000431390 SCAMP4Q969E2 229 aa18.07■□□□□ 0.48
HMGN1-206ENST00000431390 AP2M1Q96CW1 435 aa18.07■□□□□ 0.48
HMGN1-206ENST00000431390 VPS35Q96QK1 796 aa18.07■□□□□ 0.48
HMGN1-206ENST00000431390 OLFM1Q99784 485 aa18.07■□□□□ 0.48
HMGN1-206ENST00000431390 RIOK2Q9BVS4 552 aaKnown RBP18.07■□□□□ 0.48
HMGN1-206ENST00000431390 CAPS2Q9BXY5 557 aa18.07■□□□□ 0.48
HMGN1-206ENST00000431390 LMAN1LQ9HAT1 526 aa18.07■□□□□ 0.48
HMGN1-206ENST00000431390 ZDHHC3Q9NYG2 299 aa18.07■□□□□ 0.48
HMGN1-206ENST00000431390 GRID1Q9ULK0 1009 aa18.07■□□□□ 0.48
HMGN1-206ENST00000431390 FRYLO94915 3013 aa18.07■□□□□ 0.48
HMGN1-206ENST00000431390 IGLV3-16A0A075B6K0 115 aa18.06■□□□□ 0.48
HMGN1-206ENST00000431390 GOLGA8CPA6NN73 597 aa18.06■□□□□ 0.48
HMGN1-206ENST00000431390 PHGDHO43175 533 aaKnown RBP18.06■□□□□ 0.48
HMGN1-206ENST00000431390 PLRG1O43660 514 aaKnown RBP18.06■□□□□ 0.48
HMGN1-206ENST00000431390 OR1I1O60431 355 aa18.06■□□□□ 0.48
HMGN1-206ENST00000431390 MMP20O60882 483 aa18.06■□□□□ 0.48
HMGN1-206ENST00000431390 RECQL5O94762 991 aaPredicted RBP18.06■□□□□ 0.48
HMGN1-206ENST00000431390 CA5AP35218 305 aa18.06■□□□□ 0.48
HMGN1-206ENST00000431390 DPTQ07507 201 aa18.06■□□□□ 0.48
HMGN1-206ENST00000431390 SEPT7Q16181 437 aaKnown RBP18.06■□□□□ 0.48
HMGN1-206ENST00000431390 Q6ZS52 159 aa18.06■□□□□ 0.48
HMGN1-206ENST00000431390 CDHR3Q6ZTQ4 885 aa18.06■□□□□ 0.48
HMGN1-206ENST00000431390 SYT13Q7L8C5 426 aa18.06■□□□□ 0.48
HMGN1-206ENST00000431390 NUS1Q96E22 293 aa18.06■□□□□ 0.48
HMGN1-206ENST00000431390 MRGPRX1Q96LB2 322 aa18.06■□□□□ 0.48
HMGN1-206ENST00000431390 COPS8Q99627 209 aa18.06■□□□□ 0.48
HMGN1-206ENST00000431390 CLPBQ9H078 707 aa18.06■□□□□ 0.48
HMGN1-206ENST00000431390 POLMQ9NP87 494 aaPredicted RBP18.06■□□□□ 0.48
HMGN1-206ENST00000431390 GNPTGQ9UJJ9 305 aa18.06■□□□□ 0.48
HMGN1-206ENST00000431390 NCKAP1Q9Y2A7 1128 aa18.06■□□□□ 0.48
HMGN1-206ENST00000431390 ACOT9Q9Y305 439 aa18.06■□□□□ 0.48
HMGN1-206ENST00000431390 PLLPQ9Y342 182 aa18.06■□□□□ 0.48
HMGN1-206ENST00000431390 TCRBV21S2A2A0A5A6 115 aa18.05■□□□□ 0.48
HMGN1-206ENST00000431390 H3BMM5 538 aa18.05■□□□□ 0.48
HMGN1-206ENST00000431390 ATG13O75143 517 aa18.05■□□□□ 0.48
HMGN1-206ENST00000431390 ACADMP11310 421 aa18.05■□□□□ 0.48
HMGN1-206ENST00000431390 NDUFV2P19404 249 aa18.05■□□□□ 0.48
HMGN1-206ENST00000431390 SLC26A3P40879 764 aa18.05■□□□□ 0.48
HMGN1-206ENST00000431390 NSG1P42857 185 aa18.05■□□□□ 0.48
HMGN1-206ENST00000431390 DGKEP52429 567 aa18.05■□□□□ 0.48
HMGN1-206ENST00000431390 CDKN2DP55273 166 aa18.05■□□□□ 0.48
HMGN1-206ENST00000431390 GUCY1A3Q02108 690 aa18.05■□□□□ 0.48
HMGN1-206ENST00000431390 AGERQ15109 404 aa18.05■□□□□ 0.48
HMGN1-206ENST00000431390 SUMF1Q8NBK3 374 aa18.05■□□□□ 0.48
HMGN1-206ENST00000431390 MGARPQ8TDB4 240 aa18.05■□□□□ 0.48
HMGN1-206ENST00000431390 GANCQ8TET4 914 aa18.05■□□□□ 0.48
HMGN1-206ENST00000431390 HEXDCQ8WVB3 486 aa18.05■□□□□ 0.48
HMGN1-206ENST00000431390 KCNJ9Q92806 393 aa18.05■□□□□ 0.48
HMGN1-206ENST00000431390 SLC6A17Q9H1V8 727 aa18.05■□□□□ 0.48
HMGN1-206ENST00000431390 TAS2R13Q9NYV9 303 aa18.05■□□□□ 0.48
HMGN1-206ENST00000431390 COQ6Q9Y2Z9 468 aa18.05■□□□□ 0.48
HMGN1-206ENST00000431390 TM7SF2O76062 418 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 PCDH8O95206 1070 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 WISP3O95389 354 aaPredicted RBP18.04■□□□□ 0.48
HMGN1-206ENST00000431390 ASMTLO95671 621 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 ETV4P43268 484 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 WDR4P57081 412 aaKnown RBP18.04■□□□□ 0.48
HMGN1-206ENST00000431390 FZD5Q13467 585 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 UBXN2BQ14CS0 331 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 SETMARQ53H47 684 aaPredicted RBP18.04■□□□□ 0.48
HMGN1-206ENST00000431390 CTSL3PQ5NE16 218 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 KIAA1161Q6NSJ0 714 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 KYAT3Q6YP21 454 aaKnown RBP18.04■□□□□ 0.48
HMGN1-206ENST00000431390 BTN2A2Q8WVV5 523 aa18.04■□□□□ 0.48
HMGN1-206ENST00000431390 TSNARE1Q96NA8 513 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms