RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 PDGFBP01127 241 aaPredicted RBP8.79□□□□□ -1
SMC6-204ENST00000428868 DNTTP04053 509 aa8.79□□□□□ -1
SMC6-204ENST00000428868 PROCP04070 461 aa8.79□□□□□ -1
SMC6-204ENST00000428868 MPOP05164 745 aa8.79□□□□□ -1
SMC6-204ENST00000428868 DHRS4L1P0CG22 281 aa8.79□□□□□ -1
SMC6-204ENST00000428868 C7P10643 843 aa8.79□□□□□ -1
SMC6-204ENST00000428868 PKMP14618 531 aaKnown RBP8.79□□□□□ -1
SMC6-204ENST00000428868 STMN1P16949 149 aa8.79□□□□□ -1
SMC6-204ENST00000428868 ACSL1P33121 698 aa8.79□□□□□ -1
SMC6-204ENST00000428868 CRHR1P34998 444 aa8.79□□□□□ -1
SMC6-204ENST00000428868 GLRBP48167 497 aa8.79□□□□□ -1
SMC6-204ENST00000428868 SUOXP51687 545 aa8.79□□□□□ -1
SMC6-204ENST00000428868 PTPN5P54829 565 aa8.79□□□□□ -1
SMC6-204ENST00000428868 GNGT1P63211 74 aa8.79□□□□□ -1
SMC6-204ENST00000428868 POU4F1Q01851 419 aa8.79□□□□□ -1
SMC6-204ENST00000428868 CREB5Q02930 508 aa8.79□□□□□ -1
SMC6-204ENST00000428868 AARS2Q5JTZ9 985 aaKnown RBP8.79□□□□□ -1
SMC6-204ENST00000428868 DET1Q7L5Y6 550 aa8.79□□□□□ -1
SMC6-204ENST00000428868 ALYREFQ86V81 257 aaKnown RBP8.79□□□□□ -1
SMC6-204ENST00000428868 ARFGAP2Q8N6H7 521 aa8.79□□□□□ -1
SMC6-204ENST00000428868 FRMD1Q8N878 549 aa8.79□□□□□ -1
SMC6-204ENST00000428868 OR14C36Q8NHC7 312 aa8.79□□□□□ -1
SMC6-204ENST00000428868 GANCQ8TET4 914 aa8.79□□□□□ -1
SMC6-204ENST00000428868 HEXDCQ8WVB3 486 aa8.79□□□□□ -1
SMC6-204ENST00000428868 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.79□□□□□ -11e-6■■■□□ 17.7
SMC6-204ENST00000428868 RAB7BQ96AH8 199 aa8.79□□□□□ -1
SMC6-204ENST00000428868 ALKBH8Q96BT7 664 aaKnown RBP8.79□□□□□ -1
SMC6-204ENST00000428868 NXNL1Q96CM4 212 aa8.79□□□□□ -1
SMC6-204ENST00000428868 GPR78Q96P69 363 aa8.79□□□□□ -1
SMC6-204ENST00000428868 TCF12Q99081 682 aa8.79□□□□□ -1
SMC6-204ENST00000428868 PAIP2Q9BPZ3 127 aaKnown RBP8.79□□□□□ -1
SMC6-204ENST00000428868 CAPS2Q9BXY5 557 aa8.79□□□□□ -1
SMC6-204ENST00000428868 EPHX3Q9H6B9 360 aa8.79□□□□□ -1
SMC6-204ENST00000428868 CNOT10Q9H9A5 744 aaKnown RBP8.79□□□□□ -1
SMC6-204ENST00000428868 FZD3Q9NPG1 666 aa8.79□□□□□ -1
SMC6-204ENST00000428868 MBNL1Q9NR56 388 aaKnown RBP8.79□□□□□ -1
SMC6-204ENST00000428868 INTS9Q9NV88 658 aaKnown RBP8.79□□□□□ -1
SMC6-204ENST00000428868 ZDHHC3Q9NYG2 299 aa8.79□□□□□ -1
SMC6-204ENST00000428868 WNT16Q9UBV4 365 aa8.79□□□□□ -1
SMC6-204ENST00000428868 PLLPQ9Y342 182 aa8.79□□□□□ -1
SMC6-204ENST00000428868 PCYT1BQ9Y5K3 369 aaPredicted RBP8.79□□□□□ -1
SMC6-204ENST00000428868 A0A1W2PQU0 124 aa8.78□□□□□ -1
SMC6-204ENST00000428868 FAM170BA6NMN3 283 aa8.78□□□□□ -1
SMC6-204ENST00000428868 CHURC1-FNTBB4DL54 471 aa8.78□□□□□ -1
SMC6-204ENST00000428868 H3BMM5 538 aa8.78□□□□□ -1
SMC6-204ENST00000428868 TK2O00142 265 aa8.78□□□□□ -1
SMC6-204ENST00000428868 PRMT5O14744 637 aaPredicted RBP8.78□□□□□ -1
SMC6-204ENST00000428868 RAD51BO15315 384 aa8.78□□□□□ -1
SMC6-204ENST00000428868 SHOX2O60902 331 aaPredicted RBP8.78□□□□□ -1
SMC6-204ENST00000428868 ZWINTO95229 277 aa8.78□□□□□ -1
SMC6-204ENST00000428868 PCCBP05166 539 aa8.78□□□□□ -1
SMC6-204ENST00000428868 ZNF37AP17032 561 aaPredicted RBP8.78□□□□□ -1
SMC6-204ENST00000428868 RPS3P23396 243 aaKnown RBP eCLIP8.78□□□□□ -1
SMC6-204ENST00000428868 NFKBIAP25963 317 aa8.78□□□□□ -1
SMC6-204ENST00000428868 MAT2AP31153 395 aaKnown RBP8.78□□□□□ -1
SMC6-204ENST00000428868 PTGER3P43115 390 aa8.78□□□□□ -1
SMC6-204ENST00000428868 PXNP49023 591 aaPredicted RBP8.78□□□□□ -1
SMC6-204ENST00000428868 TPMTP51580 245 aa8.78□□□□□ -1
SMC6-204ENST00000428868 CLCN7P51798 805 aa8.78□□□□□ -1
SMC6-204ENST00000428868 CTSCP53634 463 aa8.78□□□□□ -1
SMC6-204ENST00000428868 ITGA9Q13797 1035 aa8.78□□□□□ -1
SMC6-204ENST00000428868 LRRC32Q14392 662 aa8.78□□□□□ -1
SMC6-204ENST00000428868 CSHL1Q14406 222 aa8.78□□□□□ -1
SMC6-204ENST00000428868 ITIH4Q14624 930 aa8.78□□□□□ -1
SMC6-204ENST00000428868 PCLAFQ15004 111 aa8.78□□□□□ -1
SMC6-204ENST00000428868 IRF4Q15306 451 aa8.78□□□□□ -1
SMC6-204ENST00000428868 E2F5Q15329 346 aa8.78□□□□□ -1
SMC6-204ENST00000428868 WSCD2Q2TBF2 565 aa8.78□□□□□ -1
SMC6-204ENST00000428868 ZNF284Q2VY69 593 aa8.78□□□□□ -1
SMC6-204ENST00000428868 GPR33Q49SQ1 333 aa8.78□□□□□ -1
SMC6-204ENST00000428868 TMEM259Q4ZIN3 620 aa8.78□□□□□ -1
SMC6-204ENST00000428868 TAF1BQ53T94 588 aaPredicted RBP8.78□□□□□ -1
SMC6-204ENST00000428868 RNF187Q5TA31 235 aaPredicted RBP8.78□□□□□ -1
SMC6-204ENST00000428868 RAET1GQ6H3X3 334 aa8.78□□□□□ -1
SMC6-204ENST00000428868 ANO7Q6IWH7 933 aa8.78□□□□□ -1
SMC6-204ENST00000428868 LRRC8EQ6NSJ5 796 aa8.78□□□□□ -1
SMC6-204ENST00000428868 PAQR3Q6TCH7 311 aa8.78□□□□□ -1
SMC6-204ENST00000428868 ATG14Q6ZNE5 492 aa8.78□□□□□ -1
SMC6-204ENST00000428868 ZNF765Q7L2R6 523 aa8.78□□□□□ -1
SMC6-204ENST00000428868 CYP2U1Q7Z449 544 aa8.78□□□□□ -1
SMC6-204ENST00000428868 CPNE9Q8IYJ1 553 aa8.78□□□□□ -1
SMC6-204ENST00000428868 NRSN1Q8IZ57 195 aa8.78□□□□□ -1
SMC6-204ENST00000428868 RBFAQ8N0V3 343 aa8.78□□□□□ -1
SMC6-204ENST00000428868 TMEM151AQ8N4L1 468 aa8.78□□□□□ -1
SMC6-204ENST00000428868 BEND7Q8N7W2 519 aaPredicted RBP8.78□□□□□ -1
SMC6-204ENST00000428868 TP53I13Q8NBR0 393 aaPredicted RBP8.78□□□□□ -1
SMC6-204ENST00000428868 DDHD1Q8NEL9 900 aa8.78□□□□□ -1
SMC6-204ENST00000428868 GABPB2Q8TAK5 448 aaPredicted RBP8.78□□□□□ -1
SMC6-204ENST00000428868 CD200R1Q8TD46 325 aa8.78□□□□□ -1
SMC6-204ENST00000428868 PTERQ96BW5 349 aa8.78□□□□□ -1
SMC6-204ENST00000428868 ULK4Q96C45 1275 aa8.78□□□□□ -1
SMC6-204ENST00000428868 MOCOSQ96EN8 888 aa8.78□□□□□ -1
SMC6-204ENST00000428868 LENG8Q96PV6 779 aaPredicted RBP8.78□□□□□ -1
SMC6-204ENST00000428868 MYOCQ99972 504 aa8.78□□□□□ -1
SMC6-204ENST00000428868 ZSCAN5AQ9BUG6 496 aa8.78□□□□□ -1
SMC6-204ENST00000428868 FBRSQ9HAH7 460 aa8.78□□□□□ -1
SMC6-204ENST00000428868 GPAMQ9HCL2 828 aa8.78□□□□□ -1
SMC6-204ENST00000428868 SARS2Q9NP81 518 aaKnown RBP8.78□□□□□ -1
SMC6-204ENST00000428868 ACSS2Q9NR19 701 aa8.78□□□□□ -1
SMC6-204ENST00000428868 SMOXQ9NWM0 555 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms