RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 DDX56Q9NY93 547 aaKnown RBP16.87■□□□□ 0.29
TRIM39-209ENST00000428728 SAE1Q9UBE0 346 aaPredicted RBP16.87■□□□□ 0.29
TRIM39-209ENST00000428728 CPNE7Q9UBL6 633 aa16.87■□□□□ 0.29
TRIM39-209ENST00000428728 ADGRG1Q9Y653 693 aa16.87■□□□□ 0.29
TRIM39-209ENST00000428728 KIR2DS5A0A0G2JLQ3 304 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 A0A0G2JNG1 304 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 B4E171 279 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 KIR2DS3K7RE56 304 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 NDST3O95803 873 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 PECAM1P16284 738 aaPredicted RBP16.86■□□□□ 0.29
TRIM39-209ENST00000428728 BPIP17213 487 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 COMTP21964 271 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 PTPN3P26045 913 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 TSPAN7P41732 249 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 RAB15P59190 212 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 KIR2DS5Q14953 304 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 PRKD1Q15139 912 aaPredicted RBP16.86■□□□□ 0.29
TRIM39-209ENST00000428728 NOMO1Q15155 1222 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 SEPT7Q16181 437 aaKnown RBP16.86■□□□□ 0.29
TRIM39-209ENST00000428728 DCAF12Q5T6F0 453 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 KAZNQ674X7 775 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 WDR74Q6RFH5 385 aaPredicted RBP16.86■□□□□ 0.29
TRIM39-209ENST00000428728 TMC3Q7Z5M5 1100 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 ADGRG6Q86SQ4 1221 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 CACNA2D3Q8IZS8 1091 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 TRAM1L1Q8N609 369 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 BMPERQ8N8U9 685 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 TADA1Q96BN2 335 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 CTRCQ99895 268 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 GOLPH3Q9H4A6 298 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 TRIM39Q9HCM9 518 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 BPIFA1Q9NP55 256 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 RAD18Q9NS91 495 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 NFKBIL1Q9UBC1 381 aaPredicted RBP16.86■□□□□ 0.29
TRIM39-209ENST00000428728 DNAJC16Q9Y2G8 782 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 SPO11Q9Y5K1 396 aa16.86■□□□□ 0.29
TRIM39-209ENST00000428728 PDZK1P1A8MUH7 402 aa16.85■□□□□ 0.29
TRIM39-209ENST00000428728 AURKAO14965 403 aa16.85■□□□□ 0.29
TRIM39-209ENST00000428728 RAD1O60671 282 aa16.85■□□□□ 0.29
TRIM39-209ENST00000428728 LIFP15018 202 aa16.85■□□□□ 0.29
TRIM39-209ENST00000428728 CDKN2BP42772 138 aa16.85■□□□□ 0.29
TRIM39-209ENST00000428728 SLC1A1P43005 524 aa16.85■□□□□ 0.29
TRIM39-209ENST00000428728 EPHA4P54764 986 aa16.85■□□□□ 0.29
TRIM39-209ENST00000428728 SLC14A2Q15849 920 aa16.85■□□□□ 0.29
TRIM39-209ENST00000428728 TBR1Q16650 682 aa16.85■□□□□ 0.29
TRIM39-209ENST00000428728 KHDC1Q4VXA5 237 aaKnown RBP16.85■□□□□ 0.29
TRIM39-209ENST00000428728 TEX44Q53QW1 395 aa16.85■□□□□ 0.29
TRIM39-209ENST00000428728 CCDC70Q6NSX1 233 aa16.85■□□□□ 0.29
TRIM39-209ENST00000428728 LRRTM4Q86VH4 590 aa16.85■□□□□ 0.29
TRIM39-209ENST00000428728 CNGA4Q8IV77 575 aa16.85■□□□□ 0.29
TRIM39-209ENST00000428728 TFB1MQ8WVM0 346 aaKnown RBP16.85■□□□□ 0.29
TRIM39-209ENST00000428728 HAUS1Q96CS2 278 aa16.85■□□□□ 0.29
TRIM39-209ENST00000428728 PLEKHG4BQ96PX9 1271 aa16.85■□□□□ 0.29
TRIM39-209ENST00000428728 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.85■□□□□ 0.29
TRIM39-209ENST00000428728 ASPSCR1Q9BZE9 553 aa16.85■□□□□ 0.29
TRIM39-209ENST00000428728 FAM117AQ9C073 453 aa16.85■□□□□ 0.29
TRIM39-209ENST00000428728 PDP2Q9P2J9 529 aa16.85■□□□□ 0.29
TRIM39-209ENST00000428728 SLC23A2Q9UGH3 650 aa16.85■□□□□ 0.29
TRIM39-209ENST00000428728 HEMK1Q9Y5R4 338 aaPredicted RBP16.85■□□□□ 0.29
TRIM39-209ENST00000428728 LILRA5A6NI73 299 aa16.84■□□□□ 0.29
TRIM39-209ENST00000428728 OR5K4A6NMS3 321 aa16.84■□□□□ 0.29
TRIM39-209ENST00000428728 CST8O60676 142 aa16.84■□□□□ 0.29
TRIM39-209ENST00000428728 NFKB1P19838 968 aa16.84■□□□□ 0.29
TRIM39-209ENST00000428728 GFERP55789 205 aa16.84■□□□□ 0.29
TRIM39-209ENST00000428728 UBE2IP63279 158 aaKnown RBP16.84■□□□□ 0.29
TRIM39-209ENST00000428728 NFKB2Q00653 900 aa16.84■□□□□ 0.29
TRIM39-209ENST00000428728 TFDP2Q14188 446 aa16.84■□□□□ 0.29
TRIM39-209ENST00000428728 SKOR2Q2VWA4 1001 aaPredicted RBP16.84■□□□□ 0.29
TRIM39-209ENST00000428728 PDPK2PQ6A1A2 396 aa16.84■□□□□ 0.29
TRIM39-209ENST00000428728 SPOCD1Q6ZMY3 1216 aa16.84■□□□□ 0.29
TRIM39-209ENST00000428728 ARHGAP22Q7Z5H3 698 aa16.84■□□□□ 0.29
TRIM39-209ENST00000428728 TRIM48Q8IWZ4 208 aa16.84■□□□□ 0.29
TRIM39-209ENST00000428728 AVL9Q8NBF6 648 aa16.84■□□□□ 0.29
TRIM39-209ENST00000428728 RTP4Q96DX8 246 aa16.84■□□□□ 0.29
TRIM39-209ENST00000428728 TEKT5Q96M29 485 aa16.84■□□□□ 0.29
TRIM39-209ENST00000428728 SLC12A9Q9BXP2 914 aa16.84■□□□□ 0.29
TRIM39-209ENST00000428728 APMAPQ9HDC9 416 aa16.84■□□□□ 0.29
TRIM39-209ENST00000428728 SCHIP1Q9P0W5 487 aaPredicted RBP16.84■□□□□ 0.29
TRIM39-209ENST00000428728 INTUQ9ULD6 942 aa16.84■□□□□ 0.29
TRIM39-209ENST00000428728 GPR89AB7ZAQ6 455 aa16.83■□□□□ 0.28
TRIM39-209ENST00000428728 AKR1B15C9JRZ8 316 aaPredicted RBP16.83■□□□□ 0.28
TRIM39-209ENST00000428728 CHUKO15111 745 aa16.83■□□□□ 0.28
TRIM39-209ENST00000428728 KMOO15229 486 aa16.83■□□□□ 0.28
TRIM39-209ENST00000428728 PSTPIP1O43586 416 aa16.83■□□□□ 0.28
TRIM39-209ENST00000428728 VIPP01282 170 aa16.83■□□□□ 0.28
TRIM39-209ENST00000428728 GPR89BP0CG08 455 aa16.83■□□□□ 0.28
TRIM39-209ENST00000428728 ZNF7P17097 686 aaPredicted RBP16.83■□□□□ 0.28
TRIM39-209ENST00000428728 TYRP1P17643 537 aa16.83■□□□□ 0.28
TRIM39-209ENST00000428728 CD68P34810 354 aaPredicted RBP16.83■□□□□ 0.28
TRIM39-209ENST00000428728 CHRNA4P43681 627 aa16.83■□□□□ 0.28
TRIM39-209ENST00000428728 CLCNKAP51800 687 aa16.83■□□□□ 0.28
TRIM39-209ENST00000428728 MC2RQ01718 297 aa16.83■□□□□ 0.28
TRIM39-209ENST00000428728 MN1Q10571 1320 aaPredicted RBP16.83■□□□□ 0.28
TRIM39-209ENST00000428728 CEACAM20Q6UY09 585 aa16.83■□□□□ 0.28
TRIM39-209ENST00000428728 ZC3H18Q86VM9 953 aaKnown RBP16.83■□□□□ 0.28
TRIM39-209ENST00000428728 TRAPPC5Q8IUR0 188 aa16.83■□□□□ 0.28
TRIM39-209ENST00000428728 CCDC50Q8IVM0 306 aa16.83■□□□□ 0.28
TRIM39-209ENST00000428728 SLC25A41Q8N5S1 370 aa16.83■□□□□ 0.28
TRIM39-209ENST00000428728 GDAP1Q8TB36 358 aa16.83■□□□□ 0.28
TRIM39-209ENST00000428728 RNF31Q96EP0 1072 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms