RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 ARMC5Q96C12 935 aa9.67□□□□□ -0.86
SNX13-203ENST00000428135 CARS2Q9HA77 564 aaKnown RBP9.67□□□□□ -0.86
SNX13-203ENST00000428135 KCNK4Q9NYG8 393 aa9.67□□□□□ -0.86
SNX13-203ENST00000428135 TMEM216Q9P0N5 145 aa9.67□□□□□ -0.86
SNX13-203ENST00000428135 SUCOQ9UBS9 1254 aaKnown RBP9.67□□□□□ -0.86
SNX13-203ENST00000428135 LEF1Q9UJU2 399 aaPredicted RBP9.67□□□□□ -0.86
SNX13-203ENST00000428135 ACTL7BQ9Y614 415 aa9.67□□□□□ -0.86
SNX13-203ENST00000428135 ADGRA3Q8IWK6 1321 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 INPPL1O15357 1258 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 TM7SF2O76062 418 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 CST1P01037 141 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 ZNF792Q3KQV3 632 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 LPCAT2Q7L5N7 544 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 FAM98AQ8NCA5 519 aaKnown RBP9.66□□□□□ -0.86
SNX13-203ENST00000428135 ZMIZ2Q8NF64 920 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 SRMSQ9H3Y6 488 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 DNAJB4Q9UDY4 337 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 ERVW-1Q9UQF0 538 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 MRPS17Q9Y2R5 130 aaKnown RBP9.66□□□□□ -0.86
SNX13-203ENST00000428135 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.66□□□□□ -0.86
SNX13-203ENST00000428135 TCF4P15884 667 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 HOXB8P17481 243 aaPredicted RBP9.66□□□□□ -0.86
SNX13-203ENST00000428135 KCNA5P22460 613 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 SLC6A2P23975 617 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 ACVRL1P37023 503 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 CCNIQ14094 377 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 BEND5Q7L4P6 421 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 SLC26A9Q7LBE3 791 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 CLVS1Q8IUQ0 354 aaPredicted RBP9.66□□□□□ -0.86
SNX13-203ENST00000428135 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.66□□□□□ -0.86
SNX13-203ENST00000428135 SLC43A3Q8NBI5 491 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 PYCR2Q96C36 320 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 TWNKQ96RR1 684 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 TRMT61BQ9BVS5 477 aaKnown RBP9.66□□□□□ -0.86
SNX13-203ENST00000428135 FZD8Q9H461 694 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 IPPKQ9H8X2 491 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 MRPL39Q9NYK5 338 aaKnown RBP9.66□□□□□ -0.86
SNX13-203ENST00000428135 ZNF624Q9P2J8 865 aaPredicted RBP9.66□□□□□ -0.86
SNX13-203ENST00000428135 SMIM31A0A1B0GVY4 71 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 FPGTO14772 594 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 IL6P05231 212 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 PHF19Q5T6S3 580 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 RSBN1Q5VWQ0 802 aaPredicted RBP9.66□□□□□ -0.86
SNX13-203ENST00000428135 ANO7Q6IWH7 933 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 RNF19BQ6ZMZ0 732 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 RTL3Q8N8U3 475 aaKnown RBP9.66□□□□□ -0.86
SNX13-203ENST00000428135 STYXQ8WUJ0 223 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 CPT1BQ92523 772 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 LMAN2LQ9H0V9 348 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 EIF2B4Q9UI10 523 aaKnown RBP9.66□□□□□ -0.86
SNX13-203ENST00000428135 ADH5P11766 374 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 PAX3P23760 479 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 ACTR1BP42025 376 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 ACTR1AP61163 376 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 TRIM71Q2Q1W2 868 aaKnown RBP9.66□□□□□ -0.86
SNX13-203ENST00000428135 ALG11Q2TAA5 492 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 INTS11Q5TA45 600 aaKnown RBP9.66□□□□□ -0.86
SNX13-203ENST00000428135 CPTPQ5TA50 214 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 GHDCQ8N2G8 530 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 TMEM130Q8N3G9 435 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 BEND7Q8N7W2 519 aaPredicted RBP9.66□□□□□ -0.86
SNX13-203ENST00000428135 MCOLN1Q9GZU1 580 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 NKX2-4Q9H2Z4 354 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 RAB21Q9UL25 225 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 RAP2CQ9Y3L5 183 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 SAMHD1Q9Y3Z3 626 aaKnown RBP9.66□□□□□ -0.86
SNX13-203ENST00000428135 ATRNL1Q5VV63 1379 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 MATN3O15232 486 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 TEAD4Q15561 434 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 SETD7Q8WTS6 366 aaKnown RBP9.66□□□□□ -0.86
SNX13-203ENST00000428135 C5orf34Q96MH7 638 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 RHOJQ9H4E5 214 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 PRDM16Q9HAZ2 1276 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 ARHGEF3Q9NR81 526 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 TLR9Q9NR96 1032 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 DNAJC11Q9NVH1 559 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 INTS7Q9NVH2 962 aaKnown RBP9.66□□□□□ -0.86
SNX13-203ENST00000428135 AP4S1Q9Y587 144 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 ZNF536O15090 1300 aa9.66□□□□□ -0.86
SNX13-203ENST00000428135 C2CD4BA6NLJ0 364 aa9.65□□□□□ -0.86
SNX13-203ENST00000428135 ATP6V0D1P61421 351 aa9.65□□□□□ -0.86
SNX13-203ENST00000428135 CREB5Q02930 508 aa9.65□□□□□ -0.86
SNX13-203ENST00000428135 SLC13A2Q13183 592 aa9.65□□□□□ -0.86
SNX13-203ENST00000428135 HGSNATQ68CP4 663 aa9.65□□□□□ -0.86
SNX13-203ENST00000428135 MBLAC2Q68D91 279 aa9.65□□□□□ -0.86
SNX13-203ENST00000428135 DAW1Q8N136 415 aa9.65□□□□□ -0.86
SNX13-203ENST00000428135 ADAMTS15Q8TE58 950 aa9.65□□□□□ -0.86
SNX13-203ENST00000428135 SPOCK2Q92563 424 aa9.65□□□□□ -0.86
SNX13-203ENST00000428135 RORBQ92753 470 aa9.65□□□□□ -0.86
SNX13-203ENST00000428135 PLD4Q96BZ4 506 aa9.65□□□□□ -0.86
SNX13-203ENST00000428135 PGM2Q96G03 612 aa9.65□□□□□ -0.86
SNX13-203ENST00000428135 QKIQ96PU8 341 aaKnown RBP eCLIP9.65□□□□□ -0.861e-6■■■■□ 26.7
SNX13-203ENST00000428135 CDK15Q96Q40 435 aa9.65□□□□□ -0.86
SNX13-203ENST00000428135 ACSS3Q9H6R3 686 aa9.65□□□□□ -0.86
SNX13-203ENST00000428135 CTPS2Q9NRF8 586 aa9.65□□□□□ -0.86
SNX13-203ENST00000428135 IL36AQ9UHA7 158 aa9.65□□□□□ -0.86
SNX13-203ENST00000428135 TBC1D30Q9Y2I9 924 aa9.65□□□□□ -0.86
SNX13-203ENST00000428135 HBS1LQ9Y450 684 aaKnown RBP9.65□□□□□ -0.86
SNX13-203ENST00000428135 EME2A4GXA9 379 aaPredicted RBP9.65□□□□□ -0.86
SNX13-203ENST00000428135 J3KR12 359 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms