RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 DPPA4Q7L190 304 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 CCDC91Q7Z6B0 441 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 GALNT7Q86SF2 657 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 TSPAN33Q86UF1 283 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 HORMAD1Q86X24 394 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 SUMF1Q8NBK3 374 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 CXorf40AQ8TE69 158 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 SREK1Q8WXA9 508 aaKnown RBP15.53■□□□□ 0.08
SHOX2-202ENST00000425436 FOXJ1Q92949 421 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 TSSK1BQ9BXA7 367 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 MIR1-1HGQ9H1L0 117 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 TMEM74BQ9NUR3 256 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 SIRPGQ9P1W8 387 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 PPIL1Q9Y3C6 166 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 WDR91A4D1P6 747 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 C10orf142B7Z368 130 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 DCTN3O75935 186 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 VAPBO95292 243 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 NDST3O95803 873 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 PAK4O96013 591 aaPredicted RBP15.53■□□□□ 0.08
SHOX2-202ENST00000425436 APOA4P06727 396 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 BPGMP07738 259 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 ATXN1LP0C7T5 689 aaKnown RBP15.53■□□□□ 0.08
SHOX2-202ENST00000425436 COL6A2P12110 1019 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 LHCGRP22888 699 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 CCR5P51681 352 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 RPL26P61254 145 aaKnown RBP15.53■□□□□ 0.08
SHOX2-202ENST00000425436 PDE1CQ14123 709 aaPredicted RBP15.53■□□□□ 0.08
SHOX2-202ENST00000425436 FGL2Q14314 439 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 SETDB1Q15047 1291 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 TSTD2Q5T7W7 516 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 NEK5Q6P3R8 708 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 CRTC1Q6UUV9 634 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 CDHR3Q6ZTQ4 885 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 USP45Q70EL2 814 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 TRIM69Q86WT6 500 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 DCLK2Q8N568 766 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 ARMC2Q8NEN0 867 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 PIGKQ92643 395 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 TSNARE1Q96NA8 513 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 AGAP2Q99490 1192 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 GPR22Q99680 433 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 MYOCQ99972 504 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 MCMBPQ9BTE3 642 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 SLC17A9Q9BYT1 436 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 TRIM55Q9BYV6 548 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 SNX15Q9NRS6 342 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 TLK1Q9UKI8 766 aa15.53■□□□□ 0.08
SHOX2-202ENST00000425436 RPL26L1Q9UNX3 145 aaKnown RBP15.53■□□□□ 0.08
SHOX2-202ENST00000425436 TNRC6BQ9UPQ9 1833 aaKnown RBP15.53■□□□□ 0.08
SHOX2-202ENST00000425436 PLXNA2O75051 1894 aa15.52■□□□□ 0.08
SHOX2-202ENST00000425436 MYO1CO00159 1063 aa15.52■□□□□ 0.07
SHOX2-202ENST00000425436 WNT9AO14904 365 aa15.52■□□□□ 0.07
SHOX2-202ENST00000425436 LATO43561 262 aa15.52■□□□□ 0.07
SHOX2-202ENST00000425436 CYP2A6P11509 494 aaPredicted RBP15.52■□□□□ 0.07
SHOX2-202ENST00000425436 VIPR1P32241 457 aa15.52■□□□□ 0.07
SHOX2-202ENST00000425436 GRIA4P48058 902 aa15.52■□□□□ 0.07
SHOX2-202ENST00000425436 CCDC6Q16204 474 aa15.52■□□□□ 0.07
SHOX2-202ENST00000425436 TMEM259Q4ZIN3 620 aa15.52■□□□□ 0.07
SHOX2-202ENST00000425436 KIAA1161Q6NSJ0 714 aa15.52■□□□□ 0.07
SHOX2-202ENST00000425436 ESRP1Q6NXG1 681 aaKnown RBP15.52■□□□□ 0.07
SHOX2-202ENST00000425436 LIPIQ6XZB0 460 aa15.52■□□□□ 0.07
SHOX2-202ENST00000425436 OTOAQ7RTW8 1153 aa15.52■□□□□ 0.07
SHOX2-202ENST00000425436 VPS39Q96JC1 886 aa15.52■□□□□ 0.07
SHOX2-202ENST00000425436 C7orf26Q96N11 449 aa15.52■□□□□ 0.07
SHOX2-202ENST00000425436 MCCC1Q96RQ3 725 aaPredicted RBP15.52■□□□□ 0.07
SHOX2-202ENST00000425436 ORAI3Q9BRQ5 295 aa15.52■□□□□ 0.07
SHOX2-202ENST00000425436 ZMYND15Q9H091 742 aa15.52■□□□□ 0.07
SHOX2-202ENST00000425436 PCED1AQ9H1Q7 454 aa15.52■□□□□ 0.07
SHOX2-202ENST00000425436 ARRDC1-AS1Q9H2J1 176 aa15.52■□□□□ 0.07
SHOX2-202ENST00000425436 FZD3Q9NPG1 666 aa15.52■□□□□ 0.07
SHOX2-202ENST00000425436 CA5BQ9Y2D0 317 aa15.52■□□□□ 0.07
SHOX2-202ENST00000425436 MROH6A6NGR9 719 aa15.51■□□□□ 0.07
SHOX2-202ENST00000425436 CAPN8A6NHC0 703 aa15.51■□□□□ 0.07
SHOX2-202ENST00000425436 LZTS3O60299 673 aaPredicted RBP15.51■□□□□ 0.07
SHOX2-202ENST00000425436 PLIN3O60664 434 aa15.51■□□□□ 0.07
SHOX2-202ENST00000425436 CLDN7O95471 211 aa15.51■□□□□ 0.07
SHOX2-202ENST00000425436 ELFN1P0C7U0 828 aa15.51■□□□□ 0.07
SHOX2-202ENST00000425436 C6P13671 934 aa15.51■□□□□ 0.07
SHOX2-202ENST00000425436 GRK2P25098 689 aa15.51■□□□□ 0.07
SHOX2-202ENST00000425436 CRABP2P29373 138 aa15.51■□□□□ 0.07
SHOX2-202ENST00000425436 PTSQ03393 145 aa15.51■□□□□ 0.07
SHOX2-202ENST00000425436 SGCGQ13326 291 aa15.51■□□□□ 0.07
SHOX2-202ENST00000425436 SEPT6Q14141 434 aa15.51■□□□□ 0.07
SHOX2-202ENST00000425436 CNGA3Q16281 694 aa15.51■□□□□ 0.07
SHOX2-202ENST00000425436 SPDYAQ5MJ70 313 aa15.51■□□□□ 0.07
SHOX2-202ENST00000425436 WDR45BQ5MNZ6 344 aa15.51■□□□□ 0.07
SHOX2-202ENST00000425436 LRRC66Q68CR7 880 aa15.51■□□□□ 0.07
SHOX2-202ENST00000425436 CGB2Q6NT52 195 aa15.51■□□□□ 0.07
SHOX2-202ENST00000425436 NEPROQ6NW34 567 aa15.51■□□□□ 0.07
SHOX2-202ENST00000425436 ZC3HC1Q86WB0 502 aaKnown RBP15.51■□□□□ 0.07
SHOX2-202ENST00000425436 C2CD4AQ8NCU7 369 aaPredicted RBP15.51■□□□□ 0.07
SHOX2-202ENST00000425436 BRSK1Q8TDC3 778 aa15.51■□□□□ 0.07
SHOX2-202ENST00000425436 SCG3Q8WXD2 468 aaKnown RBP15.51■□□□□ 0.07
SHOX2-202ENST00000425436 DNASE2BQ8WZ79 361 aa15.51■□□□□ 0.07
SHOX2-202ENST00000425436 C1QTNF2Q9BXJ5 285 aa15.51■□□□□ 0.07
SHOX2-202ENST00000425436 SLCO1B3Q9NPD5 702 aa15.51■□□□□ 0.07
SHOX2-202ENST00000425436 SPO11Q9Y5K1 396 aa15.51■□□□□ 0.07
SHOX2-202ENST00000425436 RALGAPA1Q6GYQ0 2036 aa15.5■□□□□ 0.07
SHOX2-202ENST00000425436 A0A096LPK6 155 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms