RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 LEMD2Q8NC56 503 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 RHOXF1Q8NHV9 184 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 SLC7A14Q8TBB6 771 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 FAR1Q8WVX9 515 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 RORBQ92753 470 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 ESAMQ96AP7 390 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 MAP6Q96JE9 813 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 ASPSCR1Q9BZE9 553 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 CARS2Q9HA77 564 aaKnown RBP11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 MEAF6Q9HAF1 191 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 SLC38A10Q9HBR0 1119 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 INTS10Q9NVR2 710 aaKnown RBP11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 CPSF3Q9UKF6 684 aaKnown RBP11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 DNAJC15Q9Y5T4 150 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 TBKBP1A7MCY6 615 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 LACTBL1A8MY62 500 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 ERVH48-1M5A8F1 160 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 SLC1A7O00341 560 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 VWA5AO00534 786 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 UPK1BO75841 260 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 SOAT2O75908 522 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 LCKP06239 509 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 ITIH1P19827 911 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 M6PRP20645 277 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 HRH2P25021 359 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 SH3BP2P78314 561 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 C19orf57Q0VDD7 668 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 SELPLGQ14242 412 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 PCSK7Q16549 785 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 DPYSL2Q16555 572 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 TFAP2DQ7Z6R9 452 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 PIM3Q86V86 326 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 P2RY8Q86VZ1 359 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 GALNT12Q8IXK2 581 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 OSCP1Q8WVF1 389 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 MUL1Q969V5 352 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 NEDD4LQ96PU5 975 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 BDH2Q9BUT1 245 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 DNAI2Q9GZS0 605 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 DPEP3Q9H4B8 488 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 SP140LQ9H930 580 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 ERVK13-1Q9NX77 482 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 ZNF221Q9UK13 617 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 FBXO9Q9UK97 447 aaPredicted RBP11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 ADAM28Q9UKQ2 775 aa11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 EIF3LQ9Y262 564 aaKnown RBP11.22□□□□□ -0.61
SEC61A1-202ENST00000424880 LOC100506127A0A0U1RQW1 187 aa11.21□□□□□ -0.61
SEC61A1-202ENST00000424880 FKBP9O95302 570 aa11.21□□□□□ -0.61
SEC61A1-202ENST00000424880 PTPN3P26045 913 aa11.21□□□□□ -0.61
SEC61A1-202ENST00000424880 EIF2DP41214 584 aaKnown RBP11.21□□□□□ -0.61
SEC61A1-202ENST00000424880 GMPSP49915 693 aaPredicted RBP11.21□□□□□ -0.61
SEC61A1-202ENST00000424880 NAB1Q13506 487 aa11.21□□□□□ -0.61
SEC61A1-202ENST00000424880 XKR3Q5GH77 459 aa11.21□□□□□ -0.61
SEC61A1-202ENST00000424880 PRAMEF18Q5VWM3 479 aa11.21□□□□□ -0.61
SEC61A1-202ENST00000424880 GLYATQ6IB77 296 aa11.21□□□□□ -0.61
SEC61A1-202ENST00000424880 LCN8Q6JVE9 175 aa11.21□□□□□ -0.61
SEC61A1-202ENST00000424880 ENPP6Q6UWR7 440 aa11.21□□□□□ -0.61
SEC61A1-202ENST00000424880 MICALL2Q8IY33 904 aa11.21□□□□□ -0.61
SEC61A1-202ENST00000424880 NSUN6Q8TEA1 469 aaKnown RBP11.21□□□□□ -0.61
SEC61A1-202ENST00000424880 LGALS12Q96DT0 336 aa11.21□□□□□ -0.61
SEC61A1-202ENST00000424880 HPDLQ96IR7 371 aa11.21□□□□□ -0.61
SEC61A1-202ENST00000424880 BTBD2Q9BX70 525 aa11.21□□□□□ -0.61
SEC61A1-202ENST00000424880 OR2B2Q9GZK3 357 aa11.21□□□□□ -0.61
SEC61A1-202ENST00000424880 SLIRPQ9GZT3 109 aaKnown RBP11.21□□□□□ -0.61
SEC61A1-202ENST00000424880 ENTPD7Q9NQZ7 604 aa11.21□□□□□ -0.61
SEC61A1-202ENST00000424880 ZNF302Q9NR11 478 aa11.21□□□□□ -0.61
SEC61A1-202ENST00000424880 AASDHPPTQ9NRN7 309 aa11.21□□□□□ -0.61
SEC61A1-202ENST00000424880 DICER1Q9UPY3 1922 aaKnown RBP11.21□□□□□ -0.61
SEC61A1-202ENST00000424880 TCRBV5S2A0A599 114 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 G3V2T6 193 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 UPK1AO00322 258 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 MDM4O15151 490 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 MTRF1O75570 445 aaKnown RBP11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 JCHAINP01591 159 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 CHRNA1P02708 482 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 PRKCBP05771 671 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 PCMT1P22061 227 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 WEE1P30291 646 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 SLC1A2P43004 574 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 CHRNA4P43681 627 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 HK2P52789 917 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 PPP5CP53041 499 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 P2RX3P56373 397 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 GNG2P59768 71 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 NRG1Q02297 640 aaPredicted RBP11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 HSPA14Q0VDF9 509 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 LAIR1Q6GTX8 287 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 PIWIL4Q7Z3Z4 852 aaKnown RBP11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 PSTKQ8IV42 348 aaKnown RBP11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 IPMKQ8NFU5 416 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 ISL2Q96A47 359 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 PYCR2Q96C36 320 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 ZHX1-C8orf76Q96EF9 292 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 BTN2A3PQ96KV6 586 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 FYTTD1Q96QD9 318 aaKnown RBP11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 DHRS9Q9BPW9 319 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 NAT9Q9BTE0 207 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 TBCDQ9BTW9 1192 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 TRIM15Q9C019 465 aa11.21□□□□□ -0.62
SEC61A1-202ENST00000424880 RHOJQ9H4E5 214 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms