RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 MRM3Q9HC36 420 aaKnown RBP18.25■□□□□ 0.51
HDAC6-205ENST00000423941 XAB2Q9HCS7 855 aaKnown RBP18.25■□□□□ 0.51
HDAC6-205ENST00000423941 ARFGAP3Q9NP61 516 aa18.25■□□□□ 0.51
HDAC6-205ENST00000423941 CHRAC1Q9NRG0 131 aa18.25■□□□□ 0.51
HDAC6-205ENST00000423941 TREX1Q9NSU2 369 aa18.25■□□□□ 0.51
HDAC6-205ENST00000423941 BFARQ9NZS9 450 aa18.25■□□□□ 0.51
HDAC6-205ENST00000423941 FTSJ1Q9UET6 329 aa18.25■□□□□ 0.51
HDAC6-205ENST00000423941 CACNA1AO00555 2505 aa18.25■□□□□ 0.51
HDAC6-205ENST00000423941 SPAARA0A1B0GVQ0 90 aa18.24■□□□□ 0.51
HDAC6-205ENST00000423941 CCL22O00626 93 aa18.24■□□□□ 0.51
HDAC6-205ENST00000423941 TTI1O43156 1089 aa18.24■□□□□ 0.51
HDAC6-205ENST00000423941 CKMT2P17540 419 aa18.24■□□□□ 0.51
HDAC6-205ENST00000423941 SESN2P58004 480 aaPredicted RBP18.24■□□□□ 0.51
HDAC6-205ENST00000423941 TMPRSS15P98073 1019 aa18.24■□□□□ 0.51
HDAC6-205ENST00000423941 CBLBQ13191 982 aa18.24■□□□□ 0.51
HDAC6-205ENST00000423941 ERMP1Q7Z2K6 904 aa18.24■□□□□ 0.51
HDAC6-205ENST00000423941 C11orf96Q7Z7L8 435 aa18.24■□□□□ 0.51
HDAC6-205ENST00000423941 PCGF5Q86SE9 256 aa18.24■□□□□ 0.51
HDAC6-205ENST00000423941 HOOK3Q86VS8 718 aa18.24■□□□□ 0.51
HDAC6-205ENST00000423941 C17orf82Q86X59 251 aaPredicted RBP18.24■□□□□ 0.51
HDAC6-205ENST00000423941 GALNT13Q8IUC8 556 aa18.24■□□□□ 0.51
HDAC6-205ENST00000423941 NXPE1Q8N323 547 aa18.24■□□□□ 0.51
HDAC6-205ENST00000423941 SERPINB12Q96P63 405 aa18.24■□□□□ 0.51
HDAC6-205ENST00000423941 SLC2A6Q9UGQ3 507 aa18.24■□□□□ 0.51
HDAC6-205ENST00000423941 ZNHIT2Q9UHR6 403 aa18.24■□□□□ 0.51
HDAC6-205ENST00000423941 MOSPD1Q9UJG1 213 aa18.24■□□□□ 0.51
HDAC6-205ENST00000423941 GPR34Q9UPC5 381 aa18.24■□□□□ 0.51
HDAC6-205ENST00000423941 PLEKHM1Q9Y4G2 1056 aa18.24■□□□□ 0.51
HDAC6-205ENST00000423941 PCDHGA1Q9Y5H4 931 aa18.24■□□□□ 0.51
HDAC6-205ENST00000423941 GOLGA4Q13439 2230 aaKnown RBP18.23■□□□□ 0.51
HDAC6-205ENST00000423941 GRID2O43424 1007 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 SGTAO43765 313 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 AVILO75366 819 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 MTX2O75431 263 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 CDK14O94921 469 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 ITGALP20701 1170 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 MGAT1P26572 445 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 MC4RP32245 332 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 FOXN2P32314 431 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 ACADVLP49748 655 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 CDKN1CP49918 316 aaPredicted RBP18.23■□□□□ 0.51
HDAC6-205ENST00000423941 CRADDP78560 199 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 SIM1P81133 766 aaPredicted RBP18.23■□□□□ 0.51
HDAC6-205ENST00000423941 B4GALNT1Q00973 533 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 ILF3Q12906 894 aaKnown RBP eCLIP18.23■□□□□ 0.51
HDAC6-205ENST00000423941 TUBB2AQ13885 445 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 N4BP2L1Q5TBK1 243 aaPredicted RBP18.23■□□□□ 0.51
HDAC6-205ENST00000423941 MICALCLQ6ZW33 695 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 MARK2Q7KZI7 788 aaKnown RBP18.23■□□□□ 0.51
HDAC6-205ENST00000423941 TAF8Q7Z7C8 310 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 SLC35F3Q8IY50 421 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 PIANPQ8IYJ0 282 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 AGGF1Q8N302 714 aaeCLIP18.23■□□□□ 0.51
HDAC6-205ENST00000423941 RASGEF1AQ8N9B8 481 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 GPR156Q8NFN8 814 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 SCG3Q8WXD2 468 aaKnown RBP18.23■□□□□ 0.51
HDAC6-205ENST00000423941 HDAC10Q969S8 669 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 ULK4Q96C45 1275 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 SIGLEC10Q96LC7 697 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 KRT12Q99456 494 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 TUBB2BQ9BVA1 445 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 GSDMCQ9BYG8 508 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 SPATS2LQ9NUQ6 558 aaKnown RBP18.23■□□□□ 0.51
HDAC6-205ENST00000423941 SYBUQ9NX95 663 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 NCKIPSDQ9NZQ3 722 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 ASIC3Q9UHC3 531 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 SOX13Q9UN79 622 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 DNMT3AQ9Y6K1 912 aaPredicted RBP18.23■□□□□ 0.51
HDAC6-205ENST00000423941 SLC30A1Q9Y6M5 507 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 SPEGQ15772 3267 aa18.23■□□□□ 0.51
HDAC6-205ENST00000423941 MAGEB16A2A368 324 aa18.22■□□□□ 0.51
HDAC6-205ENST00000423941 CCDC162PA2VCL2 907 aa18.22■□□□□ 0.51
HDAC6-205ENST00000423941 EME2A4GXA9 379 aaPredicted RBP18.22■□□□□ 0.51
HDAC6-205ENST00000423941 FAM187AA6NFU0 413 aa18.22■□□□□ 0.51
HDAC6-205ENST00000423941 KMOO15229 486 aa18.22■□□□□ 0.51
HDAC6-205ENST00000423941 NOBOXO60393 691 aa18.22■□□□□ 0.51
HDAC6-205ENST00000423941 AK4P27144 223 aaPredicted RBP18.22■□□□□ 0.51
HDAC6-205ENST00000423941 CACNG1Q06432 222 aa18.22■□□□□ 0.51
HDAC6-205ENST00000423941 ILKQ13418 452 aa18.22■□□□□ 0.51
HDAC6-205ENST00000423941 PPHLN1Q8NEY8 458 aaKnown RBP18.22■□□□□ 0.51
HDAC6-205ENST00000423941 TAAR2Q9P1P5 351 aa18.22■□□□□ 0.51
HDAC6-205ENST00000423941 SLC23A2Q9UGH3 650 aa18.22■□□□□ 0.51
HDAC6-205ENST00000423941 WASF3Q9UPY6 502 aa18.22■□□□□ 0.51
HDAC6-205ENST00000423941 PRKAB1Q9Y478 270 aa18.22■□□□□ 0.51
HDAC6-205ENST00000423941 GPSM3Q9Y4H4 160 aa18.22■□□□□ 0.51
HDAC6-205ENST00000423941 ASXL3Q9C0F0 2248 aa18.21■□□□□ 0.51
HDAC6-205ENST00000423941 A6NCN8 305 aa18.21■□□□□ 0.51
HDAC6-205ENST00000423941 SDR42E2A6NKP2 422 aa18.21■□□□□ 0.51
HDAC6-205ENST00000423941 SMAPO00193 183 aa18.21■□□□□ 0.51
HDAC6-205ENST00000423941 URI1O94763 535 aaPredicted RBP18.21■□□□□ 0.51
HDAC6-205ENST00000423941 FTH1P19P0C7X4 201 aa18.21■□□□□ 0.51
HDAC6-205ENST00000423941 ACRV1P26436 265 aa18.21■□□□□ 0.51
HDAC6-205ENST00000423941 NMBRP28336 390 aa18.21■□□□□ 0.51
HDAC6-205ENST00000423941 DNAJC3Q13217 504 aa18.21■□□□□ 0.51
HDAC6-205ENST00000423941 MORF4L2Q15014 288 aa18.21■□□□□ 0.51
HDAC6-205ENST00000423941 WHAMMP3Q1A5X7 153 aa18.21■□□□□ 0.51
HDAC6-205ENST00000423941 HIBCHQ6NVY1 386 aaPredicted RBP18.21■□□□□ 0.51
HDAC6-205ENST00000423941 CHST15Q7LFX5 561 aaPredicted RBP18.21■□□□□ 0.51
HDAC6-205ENST00000423941 MAATS1Q7Z4T9 603 aa18.21■□□□□ 0.51
HDAC6-205ENST00000423941 TMEM135Q86UB9 458 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms