RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 KLHL8Q9P2G9 620 aaPredicted RBP16.59■□□□□ 0.25
CCDC78-203ENST00000423653 PCDHGA3Q9Y5H0 932 aa16.59■□□□□ 0.25
CCDC78-203ENST00000423653 PCYT1BQ9Y5K3 369 aaPredicted RBP16.59■□□□□ 0.25
CCDC78-203ENST00000423653 ALG6Q9Y672 507 aa16.59■□□□□ 0.25
CCDC78-203ENST00000423653 ATMQ13315 3056 aa16.59■□□□□ 0.25
CCDC78-203ENST00000423653 TRBV23OR9-2A0A075B6M9 112 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 A6NCN8 305 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 HACD1B0YJ81 288 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 KMOO15229 486 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 VEGFDO43915 354 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 LCA5LO95447 670 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 EML2O95834 649 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 CCL4P13236 92 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 BPIP17213 487 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 NFKB1P19838 968 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 PPP2R5EQ16537 467 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 CRTC3Q6UUV7 619 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 B4GALNT4Q76KP1 1039 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 LRRTM4Q86VH4 590 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 RCOR2Q8IZ40 523 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 ART4Q93070 314 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 QKIQ96PU8 341 aaKnown RBP eCLIP16.58■□□□□ 0.24
CCDC78-203ENST00000423653 VPS35Q96QK1 796 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 FERMT1Q9BQL6 677 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 TIMM29Q9BSF4 260 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 ASPSCR1Q9BZE9 553 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 ZCCHC2Q9C0B9 1178 aaKnown RBP16.58■□□□□ 0.24
CCDC78-203ENST00000423653 ARFGAP3Q9NP61 516 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 UBP1Q9NZI7 540 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 HACD3Q9P035 362 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 SAE1Q9UBE0 346 aaPredicted RBP16.58■□□□□ 0.24
CCDC78-203ENST00000423653 CPNE7Q9UBL6 633 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 ADGRG1Q9Y653 693 aa16.58■□□□□ 0.24
CCDC78-203ENST00000423653 hCG_1818297A0A087WSY0 165 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 LILRA5A6NI73 299 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 B4E171 279 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 CHUKO15111 745 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 EFSO43281 561 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 ITGB2P05107 769 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 FGF3P11487 239 aaPredicted RBP16.57■□□□□ 0.24
CCDC78-203ENST00000423653 VCLP18206 1134 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 HMGCLP35914 325 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 TSPAN7P41732 249 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 WNT3AP56704 352 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 WASHC5Q12768 1159 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 GTF2H3Q13889 308 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 ADGRG6Q86SQ4 1221 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 DAAM2Q86T65 1068 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 VASH2Q86V25 355 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 ZC3H18Q86VM9 953 aaKnown RBP16.57■□□□□ 0.24
CCDC78-203ENST00000423653 DTX1Q86Y01 620 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 TRIM48Q8IWZ4 208 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 CALR3Q96L12 384 aaKnown RBP16.57■□□□□ 0.24
CCDC78-203ENST00000423653 TEFMQ96QE5 360 aaKnown RBP16.57■□□□□ 0.24
CCDC78-203ENST00000423653 FSD1LQ9BXM9 530 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 GOLPH3Q9H4A6 298 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 KLC4Q9NSK0 619 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 SLC39A1Q9NY26 324 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.57■□□□□ 0.24
CCDC78-203ENST00000423653 TMEM9Q9P0T7 183 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 PDP2Q9P2J9 529 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 TRHDEQ9UKU6 1024 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 PCDHGA4Q9Y5G9 962 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 PCDHA13Q9Y5I0 950 aa16.57■□□□□ 0.24
CCDC78-203ENST00000423653 PDZK1P1A8MUH7 402 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 EPOP01588 193 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 HLA-DPA1P20036 260 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 MPSTP25325 297 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 CD68P34810 354 aaPredicted RBP16.56■□□□□ 0.24
CCDC78-203ENST00000423653 MAPK9P45984 424 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 MPP3Q13368 585 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 LLGL1Q15334 1064 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 PLA2G4EQ3MJ16 856 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 DCAF12Q5T6F0 453 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 CCDC181Q5TID7 509 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 KDELC1Q6UW63 502 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 GLT6D1Q7Z4J2 308 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 ZNF605Q86T29 641 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 GDAP1Q8TB36 358 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 HTR3CQ8WXA8 447 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 NCSTNQ92542 709 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 HAUS1Q96CS2 278 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 MED8Q96G25 268 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 FCRL5Q96RD9 977 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 UCK1Q9HA47 277 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 PRDM8Q9NQV8 689 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 RSPH14Q9UHP6 348 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 PKP3Q9Y446 797 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 SPO11Q9Y5K1 396 aa16.56■□□□□ 0.24
CCDC78-203ENST00000423653 MN1Q10571 1320 aaPredicted RBP16.55■□□□□ 0.24
CCDC78-203ENST00000423653 LOC285095A0A1B0GVY8 99 aa16.55■□□□□ 0.24
CCDC78-203ENST00000423653 EFCAB7A8K855 629 aa16.55■□□□□ 0.24
CCDC78-203ENST00000423653 APOC4-APOC2K7ER74 178 aa16.55■□□□□ 0.24
CCDC78-203ENST00000423653 CDK14O94921 469 aa16.55■□□□□ 0.24
CCDC78-203ENST00000423653 APOC2P02655 101 aa16.55■□□□□ 0.24
CCDC78-203ENST00000423653 ZNF7P17097 686 aaPredicted RBP16.55■□□□□ 0.24
CCDC78-203ENST00000423653 SPAM1P38567 509 aa16.55■□□□□ 0.24
CCDC78-203ENST00000423653 MARCKSL1P49006 195 aa16.55■□□□□ 0.24
CCDC78-203ENST00000423653 COPS2P61201 443 aa16.55■□□□□ 0.24
CCDC78-203ENST00000423653 UBE2IP63279 158 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms