RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 MAGEH1Q9H213 219 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 DTNAQ9Y4J8 743 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 HIDE1A8MVS5 230 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 PCNAP12004 261 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 MAPKAPK2P49137 400 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 FOLH1Q04609 750 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 RAD51Q06609 339 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 TLR1Q15399 786 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 TCEA2Q15560 299 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 TBCCQ15814 346 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 PLPP4Q5VZY2 271 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 FAM91A1Q658Y4 838 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 LSRQ86X29 649 aaPredicted RBP11.83□□□□□ -0.52
PTPRN-204ENST00000423636 ATOH8Q96SQ7 321 aa11.83□□□□□ -0.52
PTPRN-204ENST00000423636 EML4Q9HC35 981 aaKnown RBP11.83□□□□□ -0.52
PTPRN-204ENST00000423636 TRPC5OSA6NMA1 111 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 NEDD8-MDP1E9PL57 170 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 F8W8V4 182 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 TGM5O43548 720 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 SLC25A14O95258 325 aaPredicted RBP11.82□□□□□ -0.52
PTPRN-204ENST00000423636 UGT2B4P06133 528 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 SNRPB2P08579 225 aaKnown RBP11.82□□□□□ -0.52
PTPRN-204ENST00000423636 COL6A2P12110 1019 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 PKMP14618 531 aaKnown RBP11.82□□□□□ -0.52
PTPRN-204ENST00000423636 SATB1Q01826 763 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 HSPA14Q0VDF9 509 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 PHKG1Q16816 387 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 MAP7D1Q3KQU3 841 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 KIAA0408Q6ZU52 694 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 KBTBD6Q86V97 674 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 SERPINA9Q86WD7 417 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 TMEM25Q86YD3 366 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 MIER2Q8N344 545 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 FNDC5Q8NAU1 212 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 RDH11Q8TC12 318 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 DCUN1D1Q96GG9 259 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 SCOCQ9UIL1 159 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 INSL5Q9Y5Q6 135 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 COL4A6Q14031 1691 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 PLK4O00444 970 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 C1QCP02747 245 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 VCLP18206 1134 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 HNF1BP35680 557 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 NEK2P51955 445 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 STX1BP61266 288 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 UGT3A2Q3SY77 523 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 IL27RAQ6UWB1 636 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 C16orf89Q6UX73 402 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 SLC39A5Q6ZMH5 540 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 RAB44Q7Z6P3 723 aaPredicted RBP11.82□□□□□ -0.52
PTPRN-204ENST00000423636 GPSM1Q86YR5 675 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 PQLC1Q8N2U9 271 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 CHST14Q8NCH0 376 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 PTCD2Q8WV60 388 aaKnown RBP11.82□□□□□ -0.52
PTPRN-204ENST00000423636 SCAMP4Q969E2 229 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 ZFRQ96KR1 1074 aaKnown RBP11.82□□□□□ -0.52
PTPRN-204ENST00000423636 SPATA17Q96L03 361 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 PPM1MQ96MI6 270 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 KLF16Q9BXK1 252 aaPredicted RBP11.82□□□□□ -0.52
PTPRN-204ENST00000423636 STK39Q9UEW8 545 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 PKP3Q9Y446 797 aa11.82□□□□□ -0.52
PTPRN-204ENST00000423636 AKAP10O43572 662 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 NRP2O60462 931 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 NPHS1O60500 1241 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 F11P03951 625 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 RING1Q06587 406 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 LMAN2Q12907 356 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 CHRNA6Q15825 494 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 PAGE3Q5JUK9 113 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 LETMD1Q6P1Q0 360 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 Q6ZVU0 165 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 CANT1Q8WVQ1 401 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 DLG3Q92796 817 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 EME1Q96AY2 570 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 ZNF558Q96NG5 402 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 INTS7Q9NVH2 962 aaKnown RBP11.81□□□□□ -0.52
PTPRN-204ENST00000423636 NLE1Q9NVX2 485 aaPredicted RBP11.81□□□□□ -0.52
PTPRN-204ENST00000423636 UBAP1Q9NZ09 502 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 CXXC1Q9P0U4 656 aaPredicted RBP11.81□□□□□ -0.52
PTPRN-204ENST00000423636 VTI1BQ9UEU0 232 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 INTS6Q9UL03 887 aaKnown RBP11.81□□□□□ -0.52
PTPRN-204ENST00000423636 SORCS3Q9UPU3 1222 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 SH3BP1Q9Y3L3 701 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 LCHNA4D1U4 455 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 CCNG1P51959 295 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 BOP1Q14137 746 aaKnown RBP11.81□□□□□ -0.52
PTPRN-204ENST00000423636 ARHGEF7Q14155 803 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 NAIF1Q69YI7 327 aaPredicted RBP11.81□□□□□ -0.52
PTPRN-204ENST00000423636 SLC2A7Q6PXP3 512 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 LARP4Q71RC2 724 aaKnown RBP eCLIP11.81□□□□□ -0.52
PTPRN-204ENST00000423636 ZBTB46Q86UZ6 589 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 CLYBLQ8N0X4 340 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 SLAIN1Q8ND83 568 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 CD200R1Q8TD46 325 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 ZFYVE19Q96K21 471 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 SLC29A1Q99808 456 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 MAP10Q9P2G4 905 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 LHX3Q9UBR4 397 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 FRYLO94915 3013 aa11.81□□□□□ -0.52
PTPRN-204ENST00000423636 NPIPB15A6NHN6 443 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms