RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 CDC20Q12834 499 aa15.95■□□□□ 0.14
COL18A1-205ENST00000423214 SLC10A2Q12908 348 aaPredicted RBP15.95■□□□□ 0.14
COL18A1-205ENST00000423214 PCSK7Q16549 785 aa15.95■□□□□ 0.14
COL18A1-205ENST00000423214 ODF2Q5BJF6 829 aa15.95■□□□□ 0.14
COL18A1-205ENST00000423214 CRTC3Q6UUV7 619 aa15.95■□□□□ 0.14
COL18A1-205ENST00000423214 COL26A1Q96A83 441 aa15.95■□□□□ 0.14
COL18A1-205ENST00000423214 SLC45A3Q96JT2 553 aa15.95■□□□□ 0.14
COL18A1-205ENST00000423214 RNF157Q96PX1 679 aa15.95■□□□□ 0.14
COL18A1-205ENST00000423214 ANP32EQ9BTT0 268 aa15.95■□□□□ 0.14
COL18A1-205ENST00000423214 TBC1D10AQ9BXI6 508 aa15.95■□□□□ 0.14
COL18A1-205ENST00000423214 PACSIN1Q9BY11 444 aa15.95■□□□□ 0.14
COL18A1-205ENST00000423214 CEP41Q9BYV8 373 aa15.95■□□□□ 0.14
COL18A1-205ENST00000423214 TRIT1Q9H3H1 467 aaKnown RBP15.95■□□□□ 0.14
COL18A1-205ENST00000423214 APMAPQ9HDC9 416 aa15.95■□□□□ 0.14
COL18A1-205ENST00000423214 FBXO8Q9NRD0 319 aa15.95■□□□□ 0.14
COL18A1-205ENST00000423214 RAD18Q9NS91 495 aa15.95■□□□□ 0.14
COL18A1-205ENST00000423214 KLC4Q9NSK0 619 aa15.95■□□□□ 0.14
COL18A1-205ENST00000423214 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.95■□□□□ 0.145e-7■□□□□ 10.9
COL18A1-205ENST00000423214 GPR89AB7ZAQ6 455 aa15.94■□□□□ 0.14
COL18A1-205ENST00000423214 APOL1O14791 398 aa15.94■□□□□ 0.14
COL18A1-205ENST00000423214 PPP1R12AO14974 1030 aaPredicted RBP15.94■□□□□ 0.14
COL18A1-205ENST00000423214 PIRTP0C851 137 aa15.94■□□□□ 0.14
COL18A1-205ENST00000423214 GPR89BP0CG08 455 aa15.94■□□□□ 0.14
COL18A1-205ENST00000423214 ZNF8P17098 575 aaPredicted RBP15.94■□□□□ 0.14
COL18A1-205ENST00000423214 ABHD18Q0P651 414 aa15.94■□□□□ 0.14
COL18A1-205ENST00000423214 MESDQ14696 234 aa15.94■□□□□ 0.14
COL18A1-205ENST00000423214 SLC18A3Q16572 532 aa15.94■□□□□ 0.14
COL18A1-205ENST00000423214 PDPK2PQ6A1A2 396 aa15.94■□□□□ 0.14
COL18A1-205ENST00000423214 LRRTM4Q86VH4 590 aa15.94■□□□□ 0.14
COL18A1-205ENST00000423214 RAPGEF5Q92565 580 aa15.94■□□□□ 0.14
COL18A1-205ENST00000423214 GPR63Q9BZJ6 419 aa15.94■□□□□ 0.14
COL18A1-205ENST00000423214 PRDM8Q9NQV8 689 aa15.94■□□□□ 0.14
COL18A1-205ENST00000423214 TUBD1Q9UJT1 453 aa15.94■□□□□ 0.14
COL18A1-205ENST00000423214 NENFQ9UMX5 172 aa15.94■□□□□ 0.14
COL18A1-205ENST00000423214 SHOC2Q9UQ13 582 aa15.94■□□□□ 0.14
COL18A1-205ENST00000423214 ZNF711Q9Y462 761 aa15.94■□□□□ 0.14
COL18A1-205ENST00000423214 NAV2Q8IVL1 2488 aa15.94■□□□□ 0.14
COL18A1-205ENST00000423214 LOC101059948A0A1B0GTJ6 334 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 PDZK1P1A8MUH7 402 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 ZNF487B1APH4 448 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 KMOO15229 486 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 CBFA2T2O43439 604 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 VIPP01282 170 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 KRT1P04264 644 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 CLCNKAP51800 687 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 UBE2IP63279 158 aaKnown RBP15.93■□□□□ 0.14
COL18A1-205ENST00000423214 MC1RQ01726 317 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 TLE1Q04724 770 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 FOXM1Q08050 763 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 SEPT7Q16181 437 aaKnown RBP15.93■□□□□ 0.14
COL18A1-205ENST00000423214 ZNF648Q5T619 568 aaPredicted RBP15.93■□□□□ 0.14
COL18A1-205ENST00000423214 NT5DC3Q86UY8 548 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 PTRH1Q86Y79 214 aaKnown RBP15.93■□□□□ 0.14
COL18A1-205ENST00000423214 UNC5BQ8IZJ1 945 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 TRAM1L1Q8N609 369 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 PLD5Q8N7P1 536 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 CNTD1Q8N815 330 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 GPR26Q8NDV2 337 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 STARD8Q92502 1023 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 GLYATL1Q969I3 302 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 AGAP3Q96P47 875 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 PLEKHG4BQ96PX9 1271 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 MAK16Q9BXY0 300 aaKnown RBP15.93■□□□□ 0.14
COL18A1-205ENST00000423214 TRIM39Q9HCM9 518 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 NFKBIL1Q9UBC1 381 aaPredicted RBP15.93■□□□□ 0.14
COL18A1-205ENST00000423214 DNAJC16Q9Y2G8 782 aa15.93■□□□□ 0.14
COL18A1-205ENST00000423214 TMEM184BQ9Y519 407 aaPredicted RBP15.93■□□□□ 0.14
COL18A1-205ENST00000423214 NBASA2RRP1 2371 aa15.92■□□□□ 0.14
COL18A1-205ENST00000423214 RASSF9O75901 435 aa15.92■□□□□ 0.14
COL18A1-205ENST00000423214 UBXN7O94888 489 aa15.92■□□□□ 0.14
COL18A1-205ENST00000423214 ANKRD34CP0C6C1 535 aa15.92■□□□□ 0.14
COL18A1-205ENST00000423214 TMEM253P0C7T8 217 aa15.92■□□□□ 0.14
COL18A1-205ENST00000423214 ZFXP17010 805 aaPredicted RBP15.92■□□□□ 0.14
COL18A1-205ENST00000423214 AMD1P17707 334 aa15.92■□□□□ 0.14
COL18A1-205ENST00000423214 GFERP55789 205 aa15.92■□□□□ 0.14
COL18A1-205ENST00000423214 PDK1Q15118 436 aa15.92■□□□□ 0.14
COL18A1-205ENST00000423214 CCDC70Q6NSX1 233 aa15.92■□□□□ 0.14
COL18A1-205ENST00000423214 ADGRG6Q86SQ4 1221 aa15.92■□□□□ 0.14
COL18A1-205ENST00000423214 VSIG1Q86XK7 387 aa15.92■□□□□ 0.14
COL18A1-205ENST00000423214 RFX6Q8HWS3 928 aa15.92■□□□□ 0.14
COL18A1-205ENST00000423214 ESX1Q8N693 406 aa15.92■□□□□ 0.14
COL18A1-205ENST00000423214 C9orf43Q8TAL5 461 aaPredicted RBP15.92■□□□□ 0.14
COL18A1-205ENST00000423214 IMP4Q96G21 291 aaKnown RBP15.92■□□□□ 0.14
COL18A1-205ENST00000423214 C9orf72Q96LT7 481 aa15.92■□□□□ 0.14
COL18A1-205ENST00000423214 TRIB3Q96RU7 358 aa15.92■□□□□ 0.14
COL18A1-205ENST00000423214 TIMM29Q9BSF4 260 aa15.92■□□□□ 0.14
COL18A1-205ENST00000423214 ULBP3Q9BZM4 244 aa15.92■□□□□ 0.14
COL18A1-205ENST00000423214 BRD8Q9H0E9 1235 aa15.92■□□□□ 0.14
COL18A1-205ENST00000423214 UCK1Q9HA47 277 aa15.92■□□□□ 0.14
COL18A1-205ENST00000423214 MAGEE1Q9HCI5 957 aa15.92■□□□□ 0.14
COL18A1-205ENST00000423214 POT1Q9NUX5 634 aa15.92■□□□□ 0.14
COL18A1-205ENST00000423214 ADGRG1Q9Y653 693 aa15.92■□□□□ 0.14
COL18A1-205ENST00000423214 NKX2-8O15522 239 aa15.91■□□□□ 0.14
COL18A1-205ENST00000423214 VEGFDO43915 354 aa15.91■□□□□ 0.14
COL18A1-205ENST00000423214 DLGAP3O95886 979 aa15.91■□□□□ 0.14
COL18A1-205ENST00000423214 ZNF7P17097 686 aaPredicted RBP15.91■□□□□ 0.14
COL18A1-205ENST00000423214 TYRP1P17643 537 aa15.91■□□□□ 0.14
COL18A1-205ENST00000423214 TCN2P20062 427 aa15.91■□□□□ 0.14
COL18A1-205ENST00000423214 STAT5AP42229 794 aa15.91■□□□□ 0.14
COL18A1-205ENST00000423214 TNNT3P45378 269 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms