RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 PITRM1Q5JRX3 1037 aa22.9■■□□□ 1.26
LSM8-203ENST00000422760 UGT2A3Q6UWM9 527 aa22.9■■□□□ 1.26
LSM8-203ENST00000422760 TMEM207Q6UWW9 146 aa22.9■■□□□ 1.26
LSM8-203ENST00000422760 RAB44Q7Z6P3 723 aaPredicted RBP22.9■■□□□ 1.26
LSM8-203ENST00000422760 BHLHE22Q8NFJ8 381 aaPredicted RBP22.9■■□□□ 1.26
LSM8-203ENST00000422760 SGF29Q96ES7 293 aa22.9■■□□□ 1.26
LSM8-203ENST00000422760 TRAF6Q9Y4K3 522 aa22.9■■□□□ 1.26
LSM8-203ENST00000422760 STX7O15400 261 aaKnown RBP22.89■■□□□ 1.25
LSM8-203ENST00000422760 CFLARO15519 480 aa22.89■■□□□ 1.25
LSM8-203ENST00000422760 XYLBO75191 536 aa22.89■■□□□ 1.25
LSM8-203ENST00000422760 ZNF821O75541 412 aaPredicted RBP22.89■■□□□ 1.25
LSM8-203ENST00000422760 HNRNPA1P09651 372 aaKnown RBP eCLIP22.89■■□□□ 1.25
LSM8-203ENST00000422760 CTSOP43234 321 aaPredicted RBP22.89■■□□□ 1.25
LSM8-203ENST00000422760 FASTKQ14296 549 aaKnown RBP22.89■■□□□ 1.25
LSM8-203ENST00000422760 ZNF697Q5TEC3 545 aa22.89■■□□□ 1.25
LSM8-203ENST00000422760 METTL3Q86U44 580 aaKnown RBP22.89■■□□□ 1.25
LSM8-203ENST00000422760 TMEM25Q86YD3 366 aa22.89■■□□□ 1.25
LSM8-203ENST00000422760 RHEBL1Q8TAI7 183 aa22.89■■□□□ 1.25
LSM8-203ENST00000422760 ROPN1LQ96C74 230 aa22.89■■□□□ 1.25
LSM8-203ENST00000422760 PPP1R36Q96LQ0 422 aa22.89■■□□□ 1.25
LSM8-203ENST00000422760 TNKS2Q9H2K2 1166 aa22.89■■□□□ 1.25
LSM8-203ENST00000422760 BPIFA1Q9NP55 256 aa22.89■■□□□ 1.25
LSM8-203ENST00000422760 ZNF711Q9Y462 761 aa22.89■■□□□ 1.25
LSM8-203ENST00000422760 SNRPB2P08579 225 aaKnown RBP22.88■■□□□ 1.25
LSM8-203ENST00000422760 FGF4P08620 206 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 BMP1P13497 986 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 MC4RP32245 332 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 STK19P49842 368 aaPredicted RBP22.88■■□□□ 1.25
LSM8-203ENST00000422760 STX1BP61266 288 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 MRPS22P82650 360 aaKnown RBP22.88■■□□□ 1.25
LSM8-203ENST00000422760 TIAL1Q01085 375 aaKnown RBP eCLIP22.88■■□□□ 1.25
LSM8-203ENST00000422760 FUT11Q495W5 492 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 PRSS36Q5K4E3 855 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 SAMD4BQ5PRF9 694 aaKnown RBP22.88■■□□□ 1.25
LSM8-203ENST00000422760 FOXB2Q5VYV0 432 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 LEMD2Q8NC56 503 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 PIH1D2Q8WWB5 315 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 LPGAT1Q92604 370 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 RPL10LQ96L21 214 aaKnown RBP22.88■■□□□ 1.25
LSM8-203ENST00000422760 AARSD1Q9BTE6 412 aaKnown RBP22.88■■□□□ 1.25
LSM8-203ENST00000422760 SPATA16Q9BXB7 569 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 GSTO2Q9H4Y5 243 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 VCX3AQ9NNX9 186 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 SPAG4Q9NPE6 437 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 G3BP2Q9UN86 482 aaKnown RBP22.88■■□□□ 1.25
LSM8-203ENST00000422760 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.88■■□□□ 1.25
LSM8-203ENST00000422760 UBA6A0AVT1 1052 aaPredicted RBP22.88■■□□□ 1.25
LSM8-203ENST00000422760 NEDD8-MDP1E9PL57 170 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 PER2O15055 1255 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 STAMBPO95630 424 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 IGSF6O95976 241 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 ALPIP09923 528 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 CTPS1P17812 591 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 GKP32189 559 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 MAPK8P45983 427 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 CSNK1DP48730 415 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 HERVK_113P63132 956 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 LRP8Q14114 963 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 PRMT9Q6P2P2 845 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 GRASPQ7Z6J2 395 aaPredicted RBP22.88■■□□□ 1.25
LSM8-203ENST00000422760 CLYBLQ8N0X4 340 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 AHI1Q8N157 1196 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 EFHD1Q9BUP0 239 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 ERVK-6Q9BXR3 956 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 CACNA2D2Q9NY47 1150 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 FNDC3AQ9Y2H6 1198 aaKnown RBP22.88■■□□□ 1.25
LSM8-203ENST00000422760 PCDHGA7Q9Y5G6 932 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 COMMD3-BMI1R4GMX3 469 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 SCN8AQ9UQD0 1980 aa22.88■■□□□ 1.25
LSM8-203ENST00000422760 CDH23Q9H251 3354 aa22.87■■□□□ 1.25
LSM8-203ENST00000422760 PRRC2BQ5JSZ5 2229 aaKnown RBP22.87■■□□□ 1.25
LSM8-203ENST00000422760 GRXCR1A8MXD5 290 aa22.87■■□□□ 1.25
LSM8-203ENST00000422760 RB1P06400 928 aa22.87■■□□□ 1.25
LSM8-203ENST00000422760 SRCP12931 536 aa22.87■■□□□ 1.25
LSM8-203ENST00000422760 CDKN1CP49918 316 aaPredicted RBP22.87■■□□□ 1.25
LSM8-203ENST00000422760 BCL2L1Q07817 233 aa22.87■■□□□ 1.25
LSM8-203ENST00000422760 DYNC1I2Q13409 638 aaKnown RBP22.87■■□□□ 1.25
LSM8-203ENST00000422760 ZNF77Q15935 545 aa22.87■■□□□ 1.25
LSM8-203ENST00000422760 DGKKQ5KSL6 1271 aa22.87■■□□□ 1.25
LSM8-203ENST00000422760 ZNF678Q5SXM1 525 aa22.87■■□□□ 1.25
LSM8-203ENST00000422760 CWF19L1Q69YN2 538 aaKnown RBP22.87■■□□□ 1.25
LSM8-203ENST00000422760 FAM109BQ6ICB4 259 aaPredicted RBP22.87■■□□□ 1.25
LSM8-203ENST00000422760 PSAPL1Q6NUJ1 521 aa22.87■■□□□ 1.25
LSM8-203ENST00000422760 LYSMD3Q7Z3D4 306 aa22.87■■□□□ 1.25
LSM8-203ENST00000422760 EFCAB3Q8N7B9 438 aa22.87■■□□□ 1.25
LSM8-203ENST00000422760 PCYOX1LQ8NBM8 494 aa22.87■■□□□ 1.25
LSM8-203ENST00000422760 SPDYE1Q8NFV5 336 aaPredicted RBP22.87■■□□□ 1.25
LSM8-203ENST00000422760 BBS2Q9BXC9 721 aa22.87■■□□□ 1.25
LSM8-203ENST00000422760 TRIM4Q9C037 500 aa22.87■■□□□ 1.25
LSM8-203ENST00000422760 MAGEE1Q9HCI5 957 aa22.87■■□□□ 1.25
LSM8-203ENST00000422760 NEMP2A6NFY4 417 aa22.86■■□□□ 1.25
LSM8-203ENST00000422760 ENO4A6NNW6 628 aa22.86■■□□□ 1.25
LSM8-203ENST00000422760 SOCS5O75159 536 aa22.86■■□□□ 1.25
LSM8-203ENST00000422760 VPS4BO75351 444 aa22.86■■□□□ 1.25
LSM8-203ENST00000422760 CA3P07451 260 aa22.86■■□□□ 1.25
LSM8-203ENST00000422760 HNRNPLP14866 589 aaKnown RBP eCLIP22.86■■□□□ 1.25
LSM8-203ENST00000422760 ZNF37AP17032 561 aaPredicted RBP22.86■■□□□ 1.25
LSM8-203ENST00000422760 ADRM1Q16186 407 aa22.86■■□□□ 1.25
LSM8-203ENST00000422760 ASTLQ6HA08 431 aaPredicted RBP22.86■■□□□ 1.25
LSM8-203ENST00000422760 ISCA2Q86U28 154 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms