RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 INHBCP55103 352 aa21.66■■□□□ 1.06
TRAF4-204ENST00000422344 ZNF648Q5T619 568 aaPredicted RBP21.66■■□□□ 1.06
TRAF4-204ENST00000422344 FOXR1Q6PIV2 292 aa21.66■■□□□ 1.06
TRAF4-204ENST00000422344 ZNF248Q8NDW4 579 aa21.66■■□□□ 1.06
TRAF4-204ENST00000422344 WDR36Q8NI36 951 aaKnown RBP21.66■■□□□ 1.06
TRAF4-204ENST00000422344 GDAP1Q8TB36 358 aa21.66■■□□□ 1.06
TRAF4-204ENST00000422344 PATE1Q8WXA2 126 aa21.66■■□□□ 1.06
TRAF4-204ENST00000422344 ZNF578Q96N58 590 aaPredicted RBP21.66■■□□□ 1.06
TRAF4-204ENST00000422344 ALS2CR12Q96Q35 445 aa21.66■■□□□ 1.06
TRAF4-204ENST00000422344 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.66■■□□□ 1.06
TRAF4-204ENST00000422344 KCNK6Q9Y257 313 aa21.66■■□□□ 1.06
TRAF4-204ENST00000422344 CCDC187A0A096LP49 1063 aa21.65■■□□□ 1.06
TRAF4-204ENST00000422344 STX7O15400 261 aaKnown RBP21.65■■□□□ 1.06
TRAF4-204ENST00000422344 PPFIA2O75334 1257 aa21.65■■□□□ 1.06
TRAF4-204ENST00000422344 SLC2A4P14672 509 aa21.65■■□□□ 1.06
TRAF4-204ENST00000422344 PDX1P52945 283 aa21.65■■□□□ 1.06
TRAF4-204ENST00000422344 KLF1Q13351 362 aaPredicted RBP21.65■■□□□ 1.06
TRAF4-204ENST00000422344 MAP9Q49MG5 647 aa21.65■■□□□ 1.06
TRAF4-204ENST00000422344 PCSK4Q6UW60 755 aa21.65■■□□□ 1.06
TRAF4-204ENST00000422344 ADGRG6Q86SQ4 1221 aa21.65■■□□□ 1.06
TRAF4-204ENST00000422344 LRRC8AQ8IWT6 810 aa21.65■■□□□ 1.06
TRAF4-204ENST00000422344 FAM71DQ8N9W8 422 aa21.65■■□□□ 1.06
TRAF4-204ENST00000422344 VPS35Q96QK1 796 aa21.65■■□□□ 1.06
TRAF4-204ENST00000422344 APOL2Q9BQE5 337 aa21.65■■□□□ 1.06
TRAF4-204ENST00000422344 GORASP1Q9BQQ3 440 aa21.65■■□□□ 1.06
TRAF4-204ENST00000422344 FOXP3Q9BZS1 431 aa21.65■■□□□ 1.06
TRAF4-204ENST00000422344 STN1Q9H668 368 aaKnown RBP21.65■■□□□ 1.06
TRAF4-204ENST00000422344 LZTFL1Q9NQ48 299 aa21.65■■□□□ 1.06
TRAF4-204ENST00000422344 IL17CQ9P0M4 197 aa21.65■■□□□ 1.06
TRAF4-204ENST00000422344 ATXN7L1Q9ULK2 861 aaPredicted RBP21.65■■□□□ 1.06
TRAF4-204ENST00000422344 PCYT1BQ9Y5K3 369 aaPredicted RBP21.65■■□□□ 1.06
TRAF4-204ENST00000422344 COL27A1Q8IZC6 1860 aaPredicted RBP21.64■■□□□ 1.06
TRAF4-204ENST00000422344 GLYATL1P3A0A0U1RQE8 302 aa21.64■■□□□ 1.05
TRAF4-204ENST00000422344 C5orf60A6NFR6 353 aa21.64■■□□□ 1.05
TRAF4-204ENST00000422344 C2orf81A6NN90 581 aa21.64■■□□□ 1.05
TRAF4-204ENST00000422344 BUD23O43709 281 aaKnown RBP21.64■■□□□ 1.05
TRAF4-204ENST00000422344 VEGFDO43915 354 aa21.64■■□□□ 1.05
TRAF4-204ENST00000422344 SNX2O60749 519 aa21.64■■□□□ 1.05
TRAF4-204ENST00000422344 GPR3P46089 330 aa21.64■■□□□ 1.05
TRAF4-204ENST00000422344 PPM1FP49593 454 aaPredicted RBP21.64■■□□□ 1.05
TRAF4-204ENST00000422344 PCBP4P57723 403 aaKnown RBP21.64■■□□□ 1.05
TRAF4-204ENST00000422344 OR1D5P58170 312 aa21.64■■□□□ 1.05
TRAF4-204ENST00000422344 CFHR1Q03591 330 aa21.64■■□□□ 1.05
TRAF4-204ENST00000422344 GTF2H3Q13889 308 aa21.64■■□□□ 1.05
TRAF4-204ENST00000422344 AMZ1Q400G9 498 aa21.64■■□□□ 1.05
TRAF4-204ENST00000422344 ATP13A5Q4VNC0 1218 aa21.64■■□□□ 1.05
TRAF4-204ENST00000422344 CRTC3Q6UUV7 619 aa21.64■■□□□ 1.05
TRAF4-204ENST00000422344 FAM151BQ6UXP7 276 aa21.64■■□□□ 1.05
TRAF4-204ENST00000422344 ZNF438Q7Z4V0 828 aa21.64■■□□□ 1.05
TRAF4-204ENST00000422344 B3GNT8Q7Z7M8 397 aa21.64■■□□□ 1.05
TRAF4-204ENST00000422344 LIN37Q96GY3 246 aaPredicted RBP21.64■■□□□ 1.05
TRAF4-204ENST00000422344 TTC25Q96NG3 672 aa21.64■■□□□ 1.05
TRAF4-204ENST00000422344 IL26Q9NPH9 171 aa21.64■■□□□ 1.05
TRAF4-204ENST00000422344 THSD1Q9NS62 852 aa21.64■■□□□ 1.05
TRAF4-204ENST00000422344 R3HDM2Q9Y2K5 976 aaKnown RBP21.64■■□□□ 1.05
TRAF4-204ENST00000422344 TRBV23OR9-2A0A075B6M9 112 aa21.63■■□□□ 1.05
TRAF4-204ENST00000422344 MTX2O75431 263 aa21.63■■□□□ 1.05
TRAF4-204ENST00000422344 DXOO77932 396 aaKnown RBP21.63■■□□□ 1.05
TRAF4-204ENST00000422344 CDK14O94921 469 aa21.63■■□□□ 1.05
TRAF4-204ENST00000422344 ADRA1AP35348 466 aa21.63■■□□□ 1.05
TRAF4-204ENST00000422344 B4GALNT1Q00973 533 aa21.63■■□□□ 1.05
TRAF4-204ENST00000422344 EIF3IQ13347 325 aaKnown RBP21.63■■□□□ 1.05
TRAF4-204ENST00000422344 ITGA9Q13797 1035 aa21.63■■□□□ 1.05
TRAF4-204ENST00000422344 RPS6KA1Q15418 735 aa21.63■■□□□ 1.05
TRAF4-204ENST00000422344 INSCQ1MX18 579 aa21.63■■□□□ 1.05
TRAF4-204ENST00000422344 PARP6Q2NL67 630 aa21.63■■□□□ 1.05
TRAF4-204ENST00000422344 RANBP10Q6VN20 620 aa21.63■■□□□ 1.05
TRAF4-204ENST00000422344 LRRTM4Q86VH4 590 aa21.63■■□□□ 1.05
TRAF4-204ENST00000422344 SLC35B2Q8TB61 432 aa21.63■■□□□ 1.05
TRAF4-204ENST00000422344 DTX3LQ8TDB6 740 aa21.63■■□□□ 1.05
TRAF4-204ENST00000422344 BRSK1Q8TDC3 778 aa21.63■■□□□ 1.05
TRAF4-204ENST00000422344 TBL1YQ9BQ87 522 aa21.63■■□□□ 1.05
TRAF4-204ENST00000422344 ZCCHC2Q9C0B9 1178 aaKnown RBP21.63■■□□□ 1.05
TRAF4-204ENST00000422344 ZMYND15Q9H091 742 aa21.63■■□□□ 1.05
TRAF4-204ENST00000422344 OSGEPL1Q9H4B0 414 aa21.63■■□□□ 1.05
TRAF4-204ENST00000422344 PCDHGA8Q9Y5G5 932 aa21.63■■□□□ 1.05
TRAF4-204ENST00000422344 ARHGEF17Q96PE2 2063 aaPredicted RBP21.63■■□□□ 1.05
TRAF4-204ENST00000422344 SCN8AQ9UQD0 1980 aa21.63■■□□□ 1.05
TRAF4-204ENST00000422344 TCRBV7S2A1N4TA0A589 114 aa21.62■■□□□ 1.05
TRAF4-204ENST00000422344 KMOO15229 486 aa21.62■■□□□ 1.05
TRAF4-204ENST00000422344 B4GAT1O43505 415 aa21.62■■□□□ 1.05
TRAF4-204ENST00000422344 CPNE6O95741 557 aa21.62■■□□□ 1.05
TRAF4-204ENST00000422344 LPOP22079 712 aaPredicted RBP21.62■■□□□ 1.05
TRAF4-204ENST00000422344 CCKBRP32239 447 aa21.62■■□□□ 1.05
TRAF4-204ENST00000422344 ERVPABLB-1P60509 514 aa21.62■■□□□ 1.05
TRAF4-204ENST00000422344 NR1D2Q14995 579 aa21.62■■□□□ 1.05
TRAF4-204ENST00000422344 TAF1AQ15573 450 aaPredicted RBP21.62■■□□□ 1.05
TRAF4-204ENST00000422344 CHRNA6Q15825 494 aa21.62■■□□□ 1.05
TRAF4-204ENST00000422344 P3H1Q32P28 736 aa21.62■■□□□ 1.05
TRAF4-204ENST00000422344 PLA2G4EQ3MJ16 856 aa21.62■■□□□ 1.05
TRAF4-204ENST00000422344 TAF1BQ53T94 588 aaPredicted RBP21.62■■□□□ 1.05
TRAF4-204ENST00000422344 BROXQ5VW32 411 aa21.62■■□□□ 1.05
TRAF4-204ENST00000422344 RAB11FIP2Q7L804 512 aa21.62■■□□□ 1.05
TRAF4-204ENST00000422344 PIM3Q86V86 326 aa21.62■■□□□ 1.05
TRAF4-204ENST00000422344 SFRP1Q8N474 314 aa21.62■■□□□ 1.05
TRAF4-204ENST00000422344 FBXO39Q8N4B4 442 aa21.62■■□□□ 1.05
TRAF4-204ENST00000422344 SLC37A2Q8TED4 501 aa21.62■■□□□ 1.05
TRAF4-204ENST00000422344 TMEM121Q9BTD3 319 aa21.62■■□□□ 1.05
TRAF4-204ENST00000422344 CPNE5Q9HCH3 593 aa21.62■■□□□ 1.05
TRAF4-204ENST00000422344 KLC4Q9NSK0 619 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms