RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 MLPHQ9BV36 600 aaPredicted RBP7.99□□□□□ -1.13
VIM-202ENST00000421459 SPATA16Q9BXB7 569 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 VPS18Q9P253 973 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 TLK1Q9UKI8 766 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 TMPRSS11EQ9UL52 423 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 ADGRG1Q9Y653 693 aa7.99□□□□□ -1.13
VIM-202ENST00000421459 NAV2Q8IVL1 2488 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 ARHGEF17Q96PE2 2063 aaPredicted RBP7.98□□□□□ -1.13
VIM-202ENST00000421459 A0A087X0T9 212 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 KIR2DS5A0A0G2JLQ3 304 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 A0A0G2JNG1 304 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 PIPSLA2A3N6 862 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 ANKRD66B4E2M5 251 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 KIR2DS3K7RE56 304 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 AURKAO14965 403 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 DDX3YO15523 660 aaKnown RBP7.98□□□□□ -1.13
VIM-202ENST00000421459 SPAG6O75602 509 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 RASSF9O75901 435 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 SLC25A14O95258 325 aaPredicted RBP7.98□□□□□ -1.13
VIM-202ENST00000421459 NDUFA10O95299 355 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 VIPP01282 170 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 C9P02748 559 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 CYP1A2P05177 515 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 FAM228BP0C875 321 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 MYBL1P10243 752 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 AMD1P17707 334 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 XRCC1P18887 633 aaPredicted RBP7.98□□□□□ -1.13
VIM-202ENST00000421459 CCNCP24863 283 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 CA5AP35218 305 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 EPHA4P54764 986 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 RPS18P62269 152 aaKnown RBP7.98□□□□□ -1.13
VIM-202ENST00000421459 KLRB1Q12918 225 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 CHAF1BQ13112 559 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 KIR2DS5Q14953 304 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 NOMO1Q15155 1222 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 NFKBIBQ15653 356 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 IFI16Q16666 785 aaKnown RBP7.98□□□□□ -1.13
VIM-202ENST00000421459 INSCQ1MX18 579 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 C4orf17Q53FE4 359 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 CLEC17AQ6ZS10 378 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 TMEM26Q6ZUK4 368 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 ASB18Q6ZVZ8 466 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 PLXDC1Q8IUK5 500 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 PHYKPLQ8IUZ5 450 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 RASGRP3Q8IV61 690 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 ZNF547Q8IVP9 402 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 FAM26EQ8N5C1 309 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 ESX1Q8N693 406 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 NIPA2Q8N8Q9 360 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 TEX19Q8NA77 164 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 KCTD6Q8NC69 237 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 CCNYQ8ND76 341 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 CT55Q8WUE5 264 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 NAT14Q8WUY8 206 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 CPLX3Q8WVH0 158 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 TRIM11Q96F44 468 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 LYSMD1Q96S90 227 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 ZPBPQ9BS86 351 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 HERPUD2Q9BSE4 406 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 EFHD1Q9BUP0 239 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 TRIM55Q9BYV6 548 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.98□□□□□ -1.13
VIM-202ENST00000421459 CARD9Q9H257 536 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 STN1Q9H668 368 aaKnown RBP7.98□□□□□ -1.13
VIM-202ENST00000421459 BPIFA1Q9NP55 256 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 PKD2L2Q9NZM6 624 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 IP6K2Q9UHH9 426 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 LNPEPQ9UIQ6 1025 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 WDR37Q9Y2I8 494 aa7.98□□□□□ -1.13
VIM-202ENST00000421459 MN1Q10571 1320 aaPredicted RBP7.98□□□□□ -1.13
VIM-202ENST00000421459 IGHV5-51A0A0C4DH38 117 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 A0A1B0GTH6 734 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 LILRA5A6NI73 299 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 PDZK1P1A8MUH7 402 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 GPR39O43194 453 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 NTRK1P04629 796 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 PYGLP06737 847 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 ANKRD34CP0C6C1 535 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 RNF224P0DH78 156 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 FOLR1P15328 257 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 ZNF7P17097 686 aaPredicted RBP7.97□□□□□ -1.13
VIM-202ENST00000421459 GNLYP22749 145 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 MAN1A1P33908 653 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 MC1RQ01726 317 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 SEPT6Q14141 434 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 GPR18Q14330 331 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 NR1I3Q14994 352 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 PCSK7Q16549 785 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 ZNF569Q5MCW4 686 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 CACHD1Q5VU97 1274 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 FAM69BQ5VUD6 431 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 CPZQ66K79 652 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 TIGD7Q6NT04 549 aaPredicted RBP7.97□□□□□ -1.13
VIM-202ENST00000421459 IRGCQ6NXR0 463 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 NPNTQ6UXI9 565 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 LRRC49Q8IUZ0 686 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 TRIM48Q8IWZ4 208 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 CCDC13Q8IYE1 715 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 TTC30BQ8N4P2 665 aa7.97□□□□□ -1.13
VIM-202ENST00000421459 SPATA22Q8NHS9 363 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms