RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 KHDC1Q4VXA5 237 aaKnown RBP12.36□□□□□ -0.43
TMEM53-206ENST00000420706 WDR45BQ5MNZ6 344 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 RNF187Q5TA31 235 aaPredicted RBP12.36□□□□□ -0.43
TMEM53-206ENST00000420706 PMS2CLQ68D20 193 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 ABI3BPQ7Z7G0 1075 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 ADGRG6Q86SQ4 1221 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 C1orf216Q8TAB5 229 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 FAM174AQ8TBP5 190 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 HEXDCQ8WVB3 486 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 DCAKDQ8WVC6 231 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 LPGAT1Q92604 370 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 ZC3H10Q96K80 434 aaKnown RBP12.36□□□□□ -0.43
TMEM53-206ENST00000420706 RBBP8Q99708 897 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 P2RY12Q9H244 342 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 WDR26Q9H7D7 661 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 PPCSQ9HAB8 311 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 TRIM39Q9HCM9 518 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 PHPT1Q9NRX4 125 aaPredicted RBP12.36□□□□□ -0.43
TMEM53-206ENST00000420706 ZNF180Q9UJW8 692 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 VPS9D1Q9Y2B5 631 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 CRYL1Q9Y2S2 319 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 OR1A2Q9Y585 309 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 OAS3Q9Y6K5 1087 aaKnown RBP12.36□□□□□ -0.43
TMEM53-206ENST00000420706 SLCO1B1Q9Y6L6 691 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 PRSS21Q9Y6M0 314 aa12.36□□□□□ -0.43
TMEM53-206ENST00000420706 TLDC2A0PJX2 215 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 MAP2K7O14733 419 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 PRMT5O14744 637 aaPredicted RBP12.35□□□□□ -0.43
TMEM53-206ENST00000420706 RASGRF2O14827 1237 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 RHOBTB1O94844 696 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 INHBAP08476 426 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 MYCLP1P12525 358 aaPredicted RBP12.35□□□□□ -0.43
TMEM53-206ENST00000420706 ATP1B2P14415 290 aaPredicted RBP12.35□□□□□ -0.43
TMEM53-206ENST00000420706 MSH3P20585 1137 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 FMO4P31512 558 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 SPRP35270 261 aaPredicted RBP12.35□□□□□ -0.43
TMEM53-206ENST00000420706 NSG1P42857 185 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 ABCG1P45844 678 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 DHPSP49366 369 aaPredicted RBP12.35□□□□□ -0.43
TMEM53-206ENST00000420706 ADARP55265 1226 aaKnown RBP12.35□□□□□ -0.43
TMEM53-206ENST00000420706 ZNF844Q08AG5 666 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 ZNF549Q6P9A3 640 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 KYAT3Q6YP21 454 aaKnown RBP12.35□□□□□ -0.43
TMEM53-206ENST00000420706 Q6ZSR6 202 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 CEP68Q76N32 757 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 ARMCX6Q7L4S7 300 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 TRIM74Q86UV6 250 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 ZC3HC1Q86WB0 502 aaKnown RBP12.35□□□□□ -0.43
TMEM53-206ENST00000420706 TDRPQ86YL5 185 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 PHYKPLQ8IUZ5 450 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 RGL4Q8IZJ4 473 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 RBFAQ8N0V3 343 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 EPS8L3Q8TE67 593 aaKnown RBP12.35□□□□□ -0.43
TMEM53-206ENST00000420706 SLC6A18Q96N87 628 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 BIRC8Q96P09 236 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 RHOJQ9H4E5 214 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 VIPAS39Q9H9C1 493 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 EURLQ9NYK6 297 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 TXNDC16Q9P2K2 825 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 ATXN10Q9UBB4 475 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 TMEM98Q9Y2Y6 226 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 MTO1Q9Y2Z2 717 aaKnown RBP12.35□□□□□ -0.43
TMEM53-206ENST00000420706 HCN4Q9Y3Q4 1203 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 PCDHGA2Q9Y5H1 932 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 IKBKGQ9Y6K9 419 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 TRIOO75962 3097 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 ZDBF2Q9HCK1 2354 aa12.35□□□□□ -0.43
TMEM53-206ENST00000420706 A0A1W2PR77 199 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 UBA6A0AVT1 1052 aaPredicted RBP12.34□□□□□ -0.43
TMEM53-206ENST00000420706 HMX2A2RU54 273 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 A6NNZ2 444 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 CFAP99D6REC4 459 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 CACNB4O00305 520 aaPredicted RBP12.34□□□□□ -0.43
TMEM53-206ENST00000420706 SGTAO43765 313 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 VEGFDO43915 354 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 SASH3O75995 380 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 CDK14O94921 469 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 ASMTLO95671 621 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 WNT1P04628 370 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 IVLP07476 585 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 RALBP11234 206 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 PKMP14618 531 aaKnown RBP12.34□□□□□ -0.43
TMEM53-206ENST00000420706 CD38P28907 300 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 AKT1P31749 480 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 SLCO1A2P46721 670 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 RABIFP47224 123 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 SERPINB9P50453 376 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 LIMK2P53671 638 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 KIAA1024LP59773 190 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 RACK1P63244 317 aaKnown RBP12.34□□□□□ -0.43
TMEM53-206ENST00000420706 ILF2Q12905 390 aaKnown RBP12.34□□□□□ -0.43
TMEM53-206ENST00000420706 PDE1CQ14123 709 aaPredicted RBP12.34□□□□□ -0.43
TMEM53-206ENST00000420706 RASA2Q15283 850 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 CTSL3PQ5NE16 218 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 CEP85LQ5SZL2 805 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 TPRG1LQ5T0D9 272 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 TMEM220Q6QAJ8 160 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 CLDN19Q8N6F1 224 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 RASGEF1AQ8N9B8 481 aa12.34□□□□□ -0.43
TMEM53-206ENST00000420706 MFSD2AQ8NA29 543 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms