RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 CAPN9O14815 690 aa4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 EIF3DO15371 548 aaKnown RBP eCLIP4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 FAM106CPP0CH98 169 aa4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 CETPP11597 493 aa4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 CD53P19397 219 aa4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 ANXA7P20073 488 aaKnown RBP4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 HADHAP40939 763 aa4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 PIK3CAP42336 1068 aa4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 PRCPP42785 496 aa4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 LINC01547P58512 204 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 RPL24P83731 157 aaKnown RBP4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 SREBF2Q12772 1141 aa4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 NAB2Q15742 525 aa4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 KLHL35Q6PF15 583 aa4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 GDPD4Q6W3E5 623 aa4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 KCTD8Q6ZWB6 473 aa4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 RSRC2Q7L4I2 434 aaKnown RBP4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 LMNTD1Q8N9Z9 388 aa4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 TEX19Q8NA77 164 aa4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 CMTM3Q96MX0 182 aa4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 PGLYRP2Q96PD5 576 aa4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 OR2A14Q96R47 310 aa4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 GAD1Q99259 594 aa4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 TRMT61BQ9BVS5 477 aaKnown RBP4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 MAGIXQ9H6Y5 334 aa4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 SEPT11Q9NVA2 429 aaKnown RBP4.27□□□□□ -1.73
HMGB1P49-201ENST00000418882 OR5K3A6NET4 321 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 F5H0A9 414 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 PTP4A3O75365 173 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 SCGB1D1O95968 90 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 SP1P08047 785 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 SELLP14151 372 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 GABRB1P18505 474 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 CDH2P19022 906 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 HRH2P25021 359 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 GARSP41250 739 aaKnown RBP4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 RXRGP48443 463 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 FMO5P49326 533 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 PITX1P78337 314 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 ZBED6P86452 979 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 PDE1CQ14123 709 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 MYLK3Q32MK0 819 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 TMEM35AQ53FP2 167 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 SIRPB2Q5JXA9 342 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 JADE1Q6IE81 842 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 C19orf48Q6RUI8 117 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 DCUN1D3Q8IWE4 304 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 SLC38A9Q8NBW4 561 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 UTP15Q8TED0 518 aaKnown RBP4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 TRPC4APQ8TEL6 797 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 SGCDQ92629 289 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 LINGO1Q96FE5 620 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 ZNF583Q96ND8 569 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 SRSF8Q9BRL6 282 aaKnown RBP4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 CHCHD6Q9BRQ6 235 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 EPB41L5Q9HCM4 733 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 PAG1Q9NWQ8 432 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 HCFC1R1Q9NWW0 138 aa4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 TMEM184BQ9Y519 407 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P49-201ENST00000418882 A0A1W2PR77 199 aa4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 KANSL1LA0AUZ9 987 aa4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 MAP2K7O14733 419 aa4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 SCAMP1O15126 338 aa4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 SLC22A3O75751 556 aa4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 BAIAP3O94812 1187 aa4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 ACADMP11310 421 aa4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 FGF5P12034 268 aa4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 MT3P25713 68 aa4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 TIMP3P35625 211 aa4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 PPARGP37231 505 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 IL15P40933 162 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 ARCN1P48444 511 aaKnown RBP4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 AMPHP49418 695 aa4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 GPR143P51810 404 aa4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 SIM2Q14190 667 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 NFE4Q86UQ8 179 aa4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 PRAG1Q86YV5 1406 aa4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 CEP97Q8IW35 865 aa4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 LRMDAQ9H2I8 198 aa4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 PLK3Q9H4B4 646 aa4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 MDFICQ9P1T7 246 aa4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 MARCH4Q9P2E8 410 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 TSPYL4Q9UJ04 414 aa4.25□□□□□ -1.73
HMGB1P49-201ENST00000418882 PRR23AA6NEV1 266 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 SMAD9O15198 467 aaKnown RBP4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 OGG1O15527 345 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 ZNF217O75362 1048 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 DAB1O75553 588 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 ATP1A1P05023 1023 aaKnown RBP4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 GM2AP17900 193 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 ARL3P36405 182 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 PLIN5Q00G26 463 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 MAMLD1Q13495 774 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 PCGF3Q3KNV8 242 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 ACSM2BQ68CK6 577 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 ZNF704Q6ZNC4 412 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 CCDC190Q86UF4 302 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 PM20D2Q8IYS1 436 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 DMBX1Q8NFW5 382 aa4.24□□□□□ -1.73
HMGB1P49-201ENST00000418882 LRRC8CQ8TDW0 803 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms