RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 ABATP80404 500 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 DSC1Q08554 894 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 Q0VFX4 171 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 SLC39A14Q15043 492 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 WHAMMP3Q1A5X7 153 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 DPCR1Q3MIW9 517 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 FILIP1LQ4L180 1135 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 TDRD12Q587J7 1177 aaKnown RBP2.71□□□□□ -1.98
VPS41-206ENST00000418457 C1orf141Q5JVX7 400 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 SPECC1LQ69YQ0 1117 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 CDC73Q6P1J9 531 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 PDXDC1Q6P996 788 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 KLHL24Q6TFL4 600 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 LCTLQ6UWM7 567 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 CCDC91Q7Z6B0 441 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 CPLX4Q7Z7G2 160 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 NOXA1Q86UR1 476 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 FBXL14Q8N1E6 418 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 KBTBD3Q8NAB2 608 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 MLKLQ8NB16 471 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 KCNH5Q8NCM2 988 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 NEK11Q8NG66 645 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 OR14A16Q8NHC5 309 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 ETNPPLQ8TBG4 499 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 ARRDC2Q8TBH0 407 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 CCDC12Q8WUD4 166 aaPredicted RBP2.71□□□□□ -1.98
VPS41-206ENST00000418457 UCMAQ8WVF2 138 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 TRIB2Q92519 343 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 WASF1Q92558 559 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 HDAC2Q92769 488 aaKnown RBP2.71□□□□□ -1.98
VPS41-206ENST00000418457 SMARCE1Q969G3 411 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 FBXL8Q96CD0 374 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 C8orf76Q96K31 380 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 ZNF570Q96NI8 536 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 CAMK1GQ96NX5 476 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 MYCBPQ99417 103 aaPredicted RBP2.71□□□□□ -1.98
VPS41-206ENST00000418457 PIP5K1AQ99755 562 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 FUT8Q9BYC5 575 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 PARD6BQ9BYG5 372 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 RANBP17Q9H2T7 1088 aaKnown RBP2.71□□□□□ -1.98
VPS41-206ENST00000418457 BOLA2Q9H3K6 86 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 MAGEE1Q9HCI5 957 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 CYSLTR2Q9NS75 346 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 OLA1Q9NTK5 396 aaKnown RBP2.71□□□□□ -1.98
VPS41-206ENST00000418457 CISD1Q9NZ45 108 aaKnown RBP2.71□□□□□ -1.98
VPS41-206ENST00000418457 OR6C3Q9NZP0 311 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 AASSQ9UDR5 926 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 RSPH14Q9UHP6 348 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 RGPD8O14715 1765 aaPredicted RBP2.71□□□□□ -1.98
VPS41-206ENST00000418457 SCN11AQ9UI33 1791 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 ARFGEF2Q9Y6D5 1785 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 TMEM94Q12767 1356 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 TNRQ92752 1358 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 ARHGAP23Q9P227 1491 aa2.71□□□□□ -1.98
VPS41-206ENST00000418457 ITIH6Q6UXX5 1313 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 STK36Q9NRP7 1315 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 ECM29Q5VYK3 1845 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 CHD4Q14839 1912 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 NFAT5O94916 1531 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 A0A087WUV0 522 aaPredicted RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 A0A1B0GVL5 298 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 CTAGE15A4D2H0 777 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 CTAGE9A4FU28 777 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 FAM90A8PA6NJQ4 464 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 VGLL3A8MV65 326 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 EIF3CLB5ME19 914 aaKnown RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 AKR1B15C9JRZ8 316 aaPredicted RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 E7EWF7 191 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 SNAP23O00161 211 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 CPLX1O14810 134 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 SEC14L5O43304 696 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 SEC31AO94979 1220 aaKnown RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 CTDNEP1O95476 244 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 ALPLP05186 524 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 MMP2P08253 660 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 HOXB5P09067 269 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 SPARCP09486 303 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 FAM90A13PP0C7W8 464 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 FAM90A24PP0C7X0 464 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 CTAGE8P0CG41 777 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 CD58P19256 250 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 EIF2S2P20042 333 aaKnown RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 ITGAXP20702 1163 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 AGAP20933 346 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 C21orf33P30042 268 aaPredicted RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 HOXA11P31270 313 aaPredicted RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 CDAP32320 146 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 MAN1A1P33908 653 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 HSPA1LP34931 641 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 RGS2P41220 211 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 CDKN2AP42771 156 aaKnown RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 PCYT1AP49585 367 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 HTR6P50406 440 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 CEBPZQ03701 1054 aaKnown RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 CKAP4Q07065 602 aaKnown RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 SPAG1Q07617 926 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 CRYZQ08257 329 aaKnown RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 DCTN2Q13561 401 aaKnown RBP2.7□□□□□ -1.98
VPS41-206ENST00000418457 TRIM29Q14134 588 aa2.7□□□□□ -1.98
VPS41-206ENST00000418457 NEDD9Q14511 834 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms