RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 ADAMTS4O75173 837 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 NIPSNAP2O75323 286 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 WISP3O95389 354 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 CAPNS1P04632 268 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 CKBP12277 381 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 CDH2P19022 906 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 HMOX2P30519 316 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 TPD52P55327 224 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 SREBF2Q12772 1141 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 MERTKQ12866 999 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 NR6A1Q15406 480 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 PTRHD1Q6GMV3 140 aaKnown RBP11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 LCN8Q6JVE9 175 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 HMBOX1Q6NT76 420 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 RGMBQ6NW40 437 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 BORAQ6PGQ7 559 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 MAGEE2Q8TD90 523 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 SDCCAG3Q96C92 435 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 RNF145Q96MT1 663 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 ZBTB18Q99592 522 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 MGME1Q9BQP7 344 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 GPATCH1Q9BRR8 931 aaKnown RBP11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 PKD2L2Q9NZM6 624 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 ABCD2Q9UBJ2 740 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 EIF2B4Q9UI10 523 aaKnown RBP11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 FKBPLQ9UIM3 349 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 TMCO1Q9UM00 188 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 PFDN1O60925 122 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 IRF1P10914 325 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 NCK1P16333 377 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 CES1P23141 567 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 EEF1B2P24534 225 aaKnown RBP11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 ERVK-8P63133 956 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 TUBA4AP68366 448 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 SPATS1Q496A3 300 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 INTS11Q5TA45 600 aaKnown RBP11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 CPNE9Q8IYJ1 553 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 TBC1D21Q8IYX1 336 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 GOLM1Q8NBJ4 401 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 OSCP1Q8WVF1 389 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 TADA1Q96BN2 335 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 NSMCE2Q96MF7 247 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 BDH2Q9BUT1 245 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 GPR62Q9BZJ7 368 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 C8orf4Q9NR00 106 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 TSPAN3O60637 253 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 OR4F21O95013 312 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 CDH15P55291 814 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 UFM1P61960 85 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 TNK2Q07912 1038 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 ELAVL2Q12926 359 aaKnown RBP11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 GPR17Q13304 367 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 NADSYN1Q6IA69 706 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 OGFOD2Q6N063 350 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 IL27RAQ6UWB1 636 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 CLVS1Q8IUQ0 354 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 FAM126BQ8IXS8 530 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 TFAP2CQ92754 450 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 EGFL8Q99944 293 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 GPR45Q9Y5Y3 372 aa11.6□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 GSTA4O15217 222 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 ZNF140P52738 457 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 PLIN5Q00G26 463 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 SMARCB1Q12824 385 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 GRIK2Q13002 908 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 RNF19BQ6ZMZ0 732 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 SYVN1Q86TM6 617 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 MIPOL1Q8TD10 442 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 EEF1AKMT1Q8WVE0 214 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 SEPT8Q92599 483 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 UPF1Q92900 1129 aaKnown RBP eCLIP11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 GFM2Q969S9 779 aaKnown RBP11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 ARHGAP39Q9C0H5 1083 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 PRM3Q9NNZ6 103 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 AIG1Q9NVV5 245 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 CENPFP49454 3210 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 A0A1B0GTW7 788 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 NT5C1B-RDH14C9J2C7 533 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 SNAP91O60641 907 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 ALBP02768 609 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 RPS17P08708 135 aaKnown RBP11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 UMPSP11172 480 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 PRDX3P30048 256 aaKnown RBP11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 CCND3P30281 292 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 DCTN2Q13561 401 aaKnown RBP11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 RCAN2Q14206 197 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 USP41Q3LFD5 358 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 NHSL2Q5HYW2 709 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 OTUD3Q5T2D3 398 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 IRAK1BP1Q5VVH5 260 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 KIAA1841Q6NSI8 718 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 C8orf82Q6P1X6 216 aaPredicted RBP11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 C16orf59Q7L2K0 433 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 STK40Q8N2I9 435 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 MYRFLQ96LU7 910 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 ING2Q9H160 280 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 OLAHQ9NV23 265 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 SMOXQ9NWM0 555 aa11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 TNPO3Q9Y5L0 923 aaKnown RBP11.59□□□□□ -0.55
CSPG4P3Y-201ENST00000418188 FADS3Q9Y5Q0 445 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms