RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 TSPAN7P41732 249 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 PDE6CP51160 858 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 ADCY7P51828 1080 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 BLVRAP53004 296 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 LGALS4P56470 323 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 NXPH1P58417 271 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 DSTNP60981 165 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 VSNL1P62760 191 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 GAD2Q05329 585 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 POU5F1BQ06416 359 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 DMP1Q13316 513 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 GALEQ14376 348 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 GBX1Q14549 363 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 GRM3Q14832 879 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 EMC2Q15006 297 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 ANO4Q32M45 955 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 C14orf28Q4W4Y0 310 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 CCNJQ5T5M9 372 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 ATF7IP2Q5U623 682 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 SIGIRRQ6IA17 410 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 EMBQ6PCB8 327 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 RHBDF2Q6PJF5 856 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 Q6ZUG5 572 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 USP37Q86T82 979 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 CTAGE6Q86UF2 777 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 SLC51BQ86UW2 128 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 VPS36Q86VN1 386 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 NLRP14Q86W24 1093 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 CACUL1Q86Y37 369 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 XYLT1Q86Y38 959 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 TMPRSS6Q8IU80 811 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 CTAGE4Q8IX94 777 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 NUP93Q8N1F7 819 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 ZNF276Q8N554 614 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 CCDC63Q8NA47 563 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 NOA1Q8NC60 698 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 RDM1Q8NG50 284 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 ANGPTL6Q8NI99 470 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 IFI44Q8TCB0 444 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 SCFD1Q8WVM8 642 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 STARD8Q92502 1023 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 CCT6BQ92526 530 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 PEX13Q92968 403 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 ARRDC3Q96B67 414 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 FAM136AQ96C01 138 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 HAUS1Q96CS2 278 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 ERP27Q96DN0 273 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 TMA16Q96EY4 203 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 CYFIP2Q96F07 1278 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 GIMAP5Q96F15 307 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 C1orf74Q96LT6 269 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 AIFM2Q9BRQ8 373 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 ADPGKQ9BRR6 497 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 CENPKQ9BS16 269 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 NUF2Q9BZD4 464 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 KRT23Q9C075 422 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 XPO4Q9C0E2 1151 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 PDZD7Q9H5P4 517 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 ERVMER34-1Q9H9K5 563 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 USP29Q9HBJ7 922 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 ARMC1Q9NVT9 282 aa5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 UXTQ9UBK9 157 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 MAGED2Q9UNF1 606 aaPredicted RBP5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 ZNF106Q9H2Y7 1883 aaKnown RBP5.53□□□□□ -1.52
ECHDC1-206ENST00000417628 CCDC168Q8NDH2 2452 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 ARPC4-TTLL3A0A0A6YYG9 625 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 SMIM28A0A1B0GU29 152 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 LOC105371267A0A1B0GV96 52 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 MAGEA13PA6NCF6 341 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 HNRNPCL2B2RXH8 293 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 FOXN3O00409 490 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 SLC22A1O15245 554 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 SPTLC2O15270 562 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 HOXC11O43248 304 aaPredicted RBP5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 AP1G1O43747 822 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 STX10O60499 249 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 JAK2O60674 1132 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 HNRNPCL1O60812 293 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 SDC3O75056 442 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 OLFM2O95897 454 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 PABPC4LP0CB38 370 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 CSH1P0DML2 217 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 CSH2P0DML3 217 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 CALM1P0DP23 149 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 CALM2P0DP24 149 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 CALM3P0DP25 149 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 MTHFD2P13995 350 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 CTRB1P17538 263 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 CD38P28907 300 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 PRKAR1BP31321 381 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 RPL9P32969 192 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 UGT1A5P35504 534 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 KRT6CP48668 564 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 ART1P52961 327 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 NPEPPSP55786 919 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 RPL26P61254 145 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 OLR1P78380 273 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 RUNX1T1Q06455 604 aa5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 CKAP4Q07065 602 aaKnown RBP5.52□□□□□ -1.53
ECHDC1-206ENST00000417628 NIPAL4Q0D2K0 466 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms