RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 RAD51Q06609 339 aa14.37□□□□□ -0.11
HDAC9-208ENST00000417496 NFE2Q16621 373 aaPredicted RBP14.37□□□□□ -0.11
HDAC9-208ENST00000417496 TYSND1Q2T9J0 566 aa14.37□□□□□ -0.11
HDAC9-208ENST00000417496 NANOGP8Q6NSW7 305 aa14.37□□□□□ -0.11
HDAC9-208ENST00000417496 SLC2A7Q6PXP3 512 aa14.37□□□□□ -0.11
HDAC9-208ENST00000417496 COLGALT2Q8IYK4 626 aa14.37□□□□□ -0.11
HDAC9-208ENST00000417496 EFHBQ8N7U6 833 aa14.37□□□□□ -0.11
HDAC9-208ENST00000417496 TRPV3Q8NET8 790 aa14.37□□□□□ -0.11
HDAC9-208ENST00000417496 ZNF599Q96NL3 588 aa14.37□□□□□ -0.11
HDAC9-208ENST00000417496 GPR62Q9BZJ7 368 aa14.37□□□□□ -0.11
HDAC9-208ENST00000417496 DERL2Q9GZP9 239 aa14.37□□□□□ -0.11
HDAC9-208ENST00000417496 RPF2Q9H7B2 306 aaKnown RBP14.37□□□□□ -0.11
HDAC9-208ENST00000417496 NANOGQ9H9S0 305 aa14.37□□□□□ -0.11
HDAC9-208ENST00000417496 ZFYVE28Q9HCC9 887 aa14.37□□□□□ -0.11
HDAC9-208ENST00000417496 LCHNA4D1U4 455 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 CCDC154A6NI56 674 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 SCAMP3O14828 347 aaKnown RBP14.36□□□□□ -0.11
HDAC9-208ENST00000417496 TLR5O60602 858 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 SLC22A3O75751 556 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 SNAP29O95721 258 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 CLCN2P51788 898 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 FKBP1BP68106 108 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 RCAN2Q14206 197 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 SLC36A3Q495N2 470 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 OTUD3Q5T2D3 398 aaPredicted RBP14.36□□□□□ -0.11
HDAC9-208ENST00000417496 INTS11Q5TA45 600 aaKnown RBP14.36□□□□□ -0.11
HDAC9-208ENST00000417496 MFSD2AQ8NA29 543 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 LPCAT1Q8NF37 534 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 TRIM15Q9C019 465 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 SYTL2Q9HCH5 934 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 THEGQ9P2T0 379 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 PCTPQ9UKL6 214 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 ZFP37Q9Y6Q3 630 aaPredicted RBP14.36□□□□□ -0.11
HDAC9-208ENST00000417496 ZFC3H1O60293 1989 aaKnown RBP14.36□□□□□ -0.11
HDAC9-208ENST00000417496 MAGEB3O15480 346 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 TSPAN12O95859 305 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 PRLP01236 227 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 EPOP01588 193 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 RPS17P08708 135 aaKnown RBP14.36□□□□□ -0.11
HDAC9-208ENST00000417496 OGNP20774 298 aaKnown RBP14.36□□□□□ -0.11
HDAC9-208ENST00000417496 DSC1Q08554 894 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 BNIP2Q12982 314 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 PRMT9Q6P2P2 845 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 ERI1Q8IV48 349 aaKnown RBP14.36□□□□□ -0.11
HDAC9-208ENST00000417496 FNDC5Q8NAU1 212 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 HM13Q8TCT9 377 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 CCDC97Q96F63 343 aaPredicted RBP14.36□□□□□ -0.11
HDAC9-208ENST00000417496 FUBP3Q96I24 572 aaKnown RBP eCLIP14.36□□□□□ -0.11
HDAC9-208ENST00000417496 VPS50Q96JG6 964 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 SPC25Q9HBM1 224 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 TLR8Q9NR97 1041 aaKnown RBP14.36□□□□□ -0.11
HDAC9-208ENST00000417496 NLE1Q9NVX2 485 aaPredicted RBP14.36□□□□□ -0.11
HDAC9-208ENST00000417496 FKBPLQ9UIM3 349 aa14.36□□□□□ -0.11
HDAC9-208ENST00000417496 MAGED1Q9Y5V3 778 aaPredicted RBP14.36□□□□□ -0.11
HDAC9-208ENST00000417496 TCRBV5S2A0A599 114 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 NT5C1B-RDH14C9J2C7 533 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 CLOCKO15516 846 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 B4GAT1O43505 415 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 SNX2O60749 519 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 ESRRBO95718 433 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 PCNAP12004 261 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 MYF6P23409 242 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 POLR2JP52435 117 aaKnown RBP14.35□□□□□ -0.11
HDAC9-208ENST00000417496 OR4D2P58180 307 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 GNA12Q03113 381 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 TNK2Q07912 1038 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 DUSP4Q13115 394 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 ATP6AP1Q15904 470 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 ZIK1Q3SY52 487 aaPredicted RBP14.35□□□□□ -0.11
HDAC9-208ENST00000417496 RNF19BQ6ZMZ0 732 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 GPR141Q7Z602 305 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 PROKR1Q8TCW9 393 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 ISOC1Q96CN7 298 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 PPM1MQ96MI6 270 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 RNF145Q96MT1 663 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 PLEKHG4BQ96PX9 1271 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 AIG1Q9NVV5 245 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 RHBDL2Q9NX52 303 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 CD274Q9NZQ7 290 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 FADS3Q9Y5Q0 445 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 A0A0J9YVX5 310 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 SYNCRIPO60506 623 aaKnown RBP14.35□□□□□ -0.11
HDAC9-208ENST00000417496 BMP10O95393 424 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 BMP1P13497 986 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 HRH2P25021 359 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 VARSP26640 1264 aaKnown RBP14.35□□□□□ -0.11
HDAC9-208ENST00000417496 RFC2P35250 354 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 SGSHP51688 502 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 YBEYP58557 167 aaPredicted RBP14.35□□□□□ -0.11
HDAC9-208ENST00000417496 TUBA4AP68366 448 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 PMS2P3Q13401 168 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 TBC1D25Q3MII6 688 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 C6orf136Q5SQH8 315 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 Q6ZSR9 355 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 ZBTB46Q86UZ6 589 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 SOCS4Q8WXH5 440 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.35□□□□□ -0.11
HDAC9-208ENST00000417496 BIRC7Q96CA5 298 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 HSPBAP1Q96EW2 488 aa14.35□□□□□ -0.11
HDAC9-208ENST00000417496 LINGO1Q96FE5 620 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms