RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 NDUFAF2Q8N183 169 aa12.28□□□□□ -0.44
NCKIPSD-203ENST00000415281 CCNYQ8ND76 341 aa12.28□□□□□ -0.44
NCKIPSD-203ENST00000415281 AGBL5Q8NDL9 886 aa12.28□□□□□ -0.44
NCKIPSD-203ENST00000415281 SPATA22Q8NHS9 363 aa12.28□□□□□ -0.44
NCKIPSD-203ENST00000415281 RTP4Q96DX8 246 aa12.28□□□□□ -0.44
NCKIPSD-203ENST00000415281 CTRCQ99895 268 aa12.28□□□□□ -0.44
NCKIPSD-203ENST00000415281 WDR70Q9NW82 654 aa12.28□□□□□ -0.44
NCKIPSD-203ENST00000415281 SAE1Q9UBE0 346 aaPredicted RBP12.28□□□□□ -0.44
NCKIPSD-203ENST00000415281 SHOC2Q9UQ13 582 aa12.28□□□□□ -0.44
NCKIPSD-203ENST00000415281 TTLL3Q9Y4R7 772 aa12.28□□□□□ -0.44
NCKIPSD-203ENST00000415281 ALG6Q9Y672 507 aa12.28□□□□□ -0.44
NCKIPSD-203ENST00000415281 SLC30A1Q9Y6M5 507 aa12.28□□□□□ -0.44
NCKIPSD-203ENST00000415281 A0A0A6YYK5 440 aaPredicted RBP12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 LOC101059948A0A1B0GTJ6 334 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 EFCAB7A8K855 629 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 STMND1H3BQB6 276 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 PJA2O43164 708 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 GRID2O43424 1007 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 SUV39H1O43463 412 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 SLC28A2O43868 658 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 MT-CYBP00156 380 aaPredicted RBP12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 PYGLP06737 847 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 F3P13726 295 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 BPIP17213 487 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 MX2P20592 715 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 SLC19A1P41440 591 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 SLC1A1P43005 524 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 HADHBP55084 474 aaKnown RBP12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 HHEXQ03014 270 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 KIF5AQ12840 1032 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 NOMO1Q15155 1222 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 ODF2Q5BJF6 829 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 XKR5Q6UX68 686 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 DAAM2Q86T65 1068 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 MAP7D3Q8IWC1 876 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 RHOT1Q8IXI2 618 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 CARD9Q9H257 536 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 RMI1Q9H9A7 625 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 MAGEE1Q9HCI5 957 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 TRIM39Q9HCM9 518 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 FBXO8Q9NRD0 319 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 SIDT1Q9NXL6 827 aaKnown RBP12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 SLC39A1Q9NY26 324 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 SEPT10Q9P0V9 454 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 NFKBIL1Q9UBC1 381 aaPredicted RBP12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 TRIM10Q9UDY6 481 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 HEY1Q9Y5J3 304 aa12.27□□□□□ -0.45
NCKIPSD-203ENST00000415281 MACROD2A1Z1Q3 448 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 LRRD1A4D1F6 860 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 NKX2-8O15522 239 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 DUX1O43812 170 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 RAD1O60671 282 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 SNX2O60749 519 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 WISP1O95388 367 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 DLGAP3O95886 979 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 ZNF28P17035 718 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 XRCC1P18887 633 aaPredicted RBP12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 F8A1P23610 371 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 WASHC5Q12768 1159 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 SNAP47Q5SQN1 464 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 TMEM164Q5U3C3 297 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 KDELC1Q6UW63 502 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 MFSD7Q6UXD7 560 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 NCSTNQ92542 709 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 RNF25Q96BH1 459 aaPredicted RBP12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 RNF31Q96EP0 1072 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 AGAP3Q96P47 875 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 SLC38A3Q99624 504 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 DPYSL5Q9BPU6 564 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 SLC25A51Q9H1U9 297 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 OR2AG1Q9H205 316 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 ZFYVE1Q9HBF4 777 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 GEMIN8Q9NWZ8 242 aaKnown RBP12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 PKD2L2Q9NZM6 624 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 CPNE7Q9UBL6 633 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 IL17BQ9UHF5 180 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 DNPEPQ9ULA0 475 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 TMEM184BQ9Y519 407 aaPredicted RBP12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 PCDHB11Q9Y5F2 797 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 HECTD1Q9ULT8 2610 aa12.26□□□□□ -0.45
NCKIPSD-203ENST00000415281 LOC285095A0A1B0GVY8 99 aa12.25□□□□□ -0.45
NCKIPSD-203ENST00000415281 GAPDHSO14556 408 aaPredicted RBP12.25□□□□□ -0.45
NCKIPSD-203ENST00000415281 ARHGAP6O43182 974 aa12.25□□□□□ -0.45
NCKIPSD-203ENST00000415281 MTX2O75431 263 aa12.25□□□□□ -0.45
NCKIPSD-203ENST00000415281 C9P02748 559 aa12.25□□□□□ -0.45
NCKIPSD-203ENST00000415281 KRT1P04264 644 aa12.25□□□□□ -0.45
NCKIPSD-203ENST00000415281 PECAM1P16284 738 aaPredicted RBP12.25□□□□□ -0.45
NCKIPSD-203ENST00000415281 CSTF2P33240 577 aaKnown RBP eCLIP12.25□□□□□ -0.45
NCKIPSD-203ENST00000415281 GFERP55789 205 aa12.25□□□□□ -0.45
NCKIPSD-203ENST00000415281 DCDC1P59894 354 aa12.25□□□□□ -0.45
NCKIPSD-203ENST00000415281 CDK18Q07002 472 aa12.25□□□□□ -0.45
NCKIPSD-203ENST00000415281 AP1B1Q10567 949 aa12.25□□□□□ -0.45
NCKIPSD-203ENST00000415281 PEX6Q13608 980 aa12.25□□□□□ -0.45
NCKIPSD-203ENST00000415281 PRKD1Q15139 912 aaPredicted RBP12.25□□□□□ -0.45
NCKIPSD-203ENST00000415281 LLGL1Q15334 1064 aa12.25□□□□□ -0.45
NCKIPSD-203ENST00000415281 ALS2CLQ60I27 953 aa12.25□□□□□ -0.45
NCKIPSD-203ENST00000415281 ABRAXAS1Q6UWZ7 409 aa12.25□□□□□ -0.45
NCKIPSD-203ENST00000415281 NT5DC3Q86UY8 548 aa12.25□□□□□ -0.45
NCKIPSD-203ENST00000415281 VSIG1Q86XK7 387 aa12.25□□□□□ -0.45
NCKIPSD-203ENST00000415281 UNC5BQ8IZJ1 945 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms