RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 ARHGEF2Q92974 986 aaKnown RBP2.59□□□□□ -1.99
MCF2-204ENST00000414978 MMS19Q96T76 1030 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 NAA11Q9BSU3 229 aaPredicted RBP2.59□□□□□ -1.99
MCF2-204ENST00000414978 NPLQ9BXD5 320 aaPredicted RBP2.59□□□□□ -1.99
MCF2-204ENST00000414978 ADGRE3Q9BY15 652 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 OGFRQ9NZT2 677 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 MPP6Q9NZW5 540 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 FAM30AQ9NZY2 134 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 PRDM4Q9UKN5 801 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 FAM96BQ9Y3D0 163 aa2.59□□□□□ -1.99
MCF2-204ENST00000414978 MYH8P13535 1937 aa2.59□□□□□ -2
MCF2-204ENST00000414978 GREB1LQ9C091 1923 aaPredicted RBP2.59□□□□□ -2
MCF2-204ENST00000414978 TYW5A2RUC4 315 aaKnown RBP2.59□□□□□ -2
MCF2-204ENST00000414978 FAM86B1E9PN63 330 aa2.59□□□□□ -2
MCF2-204ENST00000414978 ST8SIA3O43173 380 aa2.59□□□□□ -2
MCF2-204ENST00000414978 PPFIA2O75334 1257 aa2.59□□□□□ -2
MCF2-204ENST00000414978 PRDM1O75626 825 aa2.59□□□□□ -2
MCF2-204ENST00000414978 SEC14L2O76054 403 aa2.59□□□□□ -2
MCF2-204ENST00000414978 SNX4O95219 450 aa2.59□□□□□ -2
MCF2-204ENST00000414978 FAM86B2P0C5J1 330 aa2.59□□□□□ -2
MCF2-204ENST00000414978 ITGAMP11215 1152 aa2.59□□□□□ -2
MCF2-204ENST00000414978 EZRP15311 586 aaKnown RBP2.59□□□□□ -2
MCF2-204ENST00000414978 GAP43P17677 238 aa2.59□□□□□ -2
MCF2-204ENST00000414978 HIBADHP31937 336 aaKnown RBP2.59□□□□□ -2
MCF2-204ENST00000414978 ABHD18Q0P651 414 aa2.59□□□□□ -2
MCF2-204ENST00000414978 RRP1BQ14684 758 aaKnown RBP2.59□□□□□ -2
MCF2-204ENST00000414978 ME3Q16798 604 aa2.59□□□□□ -2
MCF2-204ENST00000414978 ASTE1Q2TB18 679 aaPredicted RBP2.59□□□□□ -2
MCF2-204ENST00000414978 AARDQ4LEZ3 155 aa2.59□□□□□ -2
MCF2-204ENST00000414978 HERC4Q5GLZ8 1057 aaPredicted RBP2.59□□□□□ -2
MCF2-204ENST00000414978 SERTAD4-AS1Q5TG53 156 aa2.59□□□□□ -2
MCF2-204ENST00000414978 PSRC1Q6PGN9 363 aaPredicted RBP2.59□□□□□ -2
MCF2-204ENST00000414978 C11orf88Q6PI97 169 aa2.59□□□□□ -2
MCF2-204ENST00000414978 ANKRD33Q7Z3H0 272 aa2.59□□□□□ -2
MCF2-204ENST00000414978 IQCHQ86VS3 1027 aa2.59□□□□□ -2
MCF2-204ENST00000414978 UNC45BQ8IWX7 931 aa2.59□□□□□ -2
MCF2-204ENST00000414978 SCYL3Q8IZE3 742 aa2.59□□□□□ -2
MCF2-204ENST00000414978 HMGCLL1Q8TB92 370 aa2.59□□□□□ -2
MCF2-204ENST00000414978 LRRC3BQ96PB8 259 aa2.59□□□□□ -2
MCF2-204ENST00000414978 DDOQ99489 341 aa2.59□□□□□ -2
MCF2-204ENST00000414978 ISCUQ9H1K1 167 aa2.59□□□□□ -2
MCF2-204ENST00000414978 PIGMQ9H3S5 423 aa2.59□□□□□ -2
MCF2-204ENST00000414978 DENND2DQ9H6A0 471 aaPredicted RBP2.59□□□□□ -2
MCF2-204ENST00000414978 PFDN4Q9NQP4 134 aa2.59□□□□□ -2
MCF2-204ENST00000414978 ABHD10Q9NUJ1 306 aa2.59□□□□□ -2
MCF2-204ENST00000414978 MTUS1Q9ULD2 1270 aa2.59□□□□□ -2
MCF2-204ENST00000414978 PAXBP1Q9Y5B6 917 aa2.59□□□□□ -2
MCF2-204ENST00000414978 LIPGQ9Y5X9 500 aa2.59□□□□□ -2
MCF2-204ENST00000414978 SIRT4Q9Y6E7 314 aaPredicted RBP2.59□□□□□ -2
MCF2-204ENST00000414978 A0A0A0MQY5 61 aa2.58□□□□□ -2
MCF2-204ENST00000414978 MYADML2A6NDP7 307 aa2.58□□□□□ -2
MCF2-204ENST00000414978 GLOD5A6NK44 160 aa2.58□□□□□ -2
MCF2-204ENST00000414978 OR6C76A6NM76 312 aa2.58□□□□□ -2
MCF2-204ENST00000414978 KIAA1324LA8MWY0 1029 aaPredicted RBP2.58□□□□□ -2
MCF2-204ENST00000414978 CACNB4O00305 520 aaPredicted RBP2.58□□□□□ -2
MCF2-204ENST00000414978 PSMA7O14818 248 aa2.58□□□□□ -2
MCF2-204ENST00000414978 CCNT1O60563 726 aaKnown RBP2.58□□□□□ -2
MCF2-204ENST00000414978 UGDHO60701 494 aa2.58□□□□□ -2
MCF2-204ENST00000414978 NME6O75414 186 aaPredicted RBP2.58□□□□□ -2
MCF2-204ENST00000414978 PMPCBO75439 489 aa2.58□□□□□ -2
MCF2-204ENST00000414978 BCAS2O75934 225 aaPredicted RBP2.58□□□□□ -2
MCF2-204ENST00000414978 PCCAP05165 728 aaPredicted RBP2.58□□□□□ -2
MCF2-204ENST00000414978 CCDC175P0C221 793 aa2.58□□□□□ -2
MCF2-204ENST00000414978 PKMP14618 531 aaKnown RBP2.58□□□□□ -2
MCF2-204ENST00000414978 ST6GAL1P15907 406 aa2.58□□□□□ -2
MCF2-204ENST00000414978 PTPN3P26045 913 aa2.58□□□□□ -2
MCF2-204ENST00000414978 HSPA4P34932 840 aa2.58□□□□□ -2
MCF2-204ENST00000414978 MTNR1AP48039 350 aa2.58□□□□□ -2
MCF2-204ENST00000414978 CD97P48960 835 aa2.58□□□□□ -2
MCF2-204ENST00000414978 DIO1P49895 249 aa2.58□□□□□ -2
MCF2-204ENST00000414978 ANXA11P50995 505 aaKnown RBP2.58□□□□□ -2
MCF2-204ENST00000414978 RPS6KA3P51812 740 aa2.58□□□□□ -2
MCF2-204ENST00000414978 TAP1Q03518 808 aa2.58□□□□□ -2
MCF2-204ENST00000414978 CSTF3Q12996 717 aaKnown RBP2.58□□□□□ -2
MCF2-204ENST00000414978 CBX3Q13185 183 aa2.58□□□□□ -2
MCF2-204ENST00000414978 PPIGQ13427 754 aaKnown RBP eCLIP2.58□□□□□ -2
MCF2-204ENST00000414978 IFI44LQ53G44 452 aa2.58□□□□□ -2
MCF2-204ENST00000414978 SOWAHCQ53LP3 525 aaPredicted RBP2.58□□□□□ -2
MCF2-204ENST00000414978 C9orf152Q5JTZ5 239 aa2.58□□□□□ -2
MCF2-204ENST00000414978 PRR31Q5SQ13 230 aa2.58□□□□□ -2
MCF2-204ENST00000414978 FAM102AQ5T9C2 384 aaPredicted RBP2.58□□□□□ -2
MCF2-204ENST00000414978 ARHGAP11AQ6P4F7 1023 aa2.58□□□□□ -2
MCF2-204ENST00000414978 KCNV1Q6PIU1 500 aa2.58□□□□□ -2
MCF2-204ENST00000414978 SLC39A5Q6ZMH5 540 aa2.58□□□□□ -2
MCF2-204ENST00000414978 ZBTB49Q6ZSB9 765 aa2.58□□□□□ -2
MCF2-204ENST00000414978 MARK2Q7KZI7 788 aaKnown RBP2.58□□□□□ -2
MCF2-204ENST00000414978 CAMKMTQ7Z624 323 aa2.58□□□□□ -2
MCF2-204ENST00000414978 TMEM110Q86TL2 294 aa2.58□□□□□ -2
MCF2-204ENST00000414978 ADIPOR2Q86V24 386 aa2.58□□□□□ -2
MCF2-204ENST00000414978 FAM124AQ86V42 546 aa2.58□□□□□ -2
MCF2-204ENST00000414978 IQCF2Q8IXL9 164 aa2.58□□□□□ -2
MCF2-204ENST00000414978 CAMKVQ8NCB2 501 aa2.58□□□□□ -2
MCF2-204ENST00000414978 NSMCE1Q8WV22 266 aa2.58□□□□□ -2
MCF2-204ENST00000414978 RAB40AQ8WXH6 277 aa2.58□□□□□ -2
MCF2-204ENST00000414978 AKAP1Q92667 903 aaKnown RBP eCLIP2.58□□□□□ -2
MCF2-204ENST00000414978 NACC2Q96BF6 587 aa2.58□□□□□ -2
MCF2-204ENST00000414978 NPAS1Q99742 590 aa2.58□□□□□ -2
MCF2-204ENST00000414978 NRDE2Q9H7Z3 1164 aa2.58□□□□□ -2
MCF2-204ENST00000414978 GPR108Q9NPR9 543 aa2.58□□□□□ -2
MCF2-204ENST00000414978 HEY2Q9UBP5 337 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms