RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 LRMDAQ9H2I8 198 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 ASB8Q9H765 288 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 PPCSQ9HAB8 311 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 IRAK4Q9NWZ3 460 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 PKD2L2Q9NZM6 624 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 EBF1Q9UH73 591 aa15.41■□□□□ 0.06
SHMT2-202ENST00000414700 MTO1Q9Y2Z2 717 aaKnown RBP15.41■□□□□ 0.06
SHMT2-202ENST00000414700 FAM47DPA6NHR8 397 aa15.4■□□□□ 0.06
SHMT2-202ENST00000414700 TRIM49D1C9J1S8 452 aa15.4■□□□□ 0.06
SHMT2-202ENST00000414700 OR1I1O60431 355 aa15.4■□□□□ 0.06
SHMT2-202ENST00000414700 RECQL5O94762 991 aaPredicted RBP15.4■□□□□ 0.06
SHMT2-202ENST00000414700 PCDH8O95206 1070 aa15.4■□□□□ 0.06
SHMT2-202ENST00000414700 C7P10643 843 aa15.4■□□□□ 0.06
SHMT2-202ENST00000414700 TPMTP51580 245 aa15.4■□□□□ 0.06
SHMT2-202ENST00000414700 SUOXP51687 545 aa15.4■□□□□ 0.06
SHMT2-202ENST00000414700 ADPRHP54922 357 aa15.4■□□□□ 0.06
SHMT2-202ENST00000414700 KLC1Q07866 573 aa15.4■□□□□ 0.06
SHMT2-202ENST00000414700 SEL1L3Q68CR1 1132 aa15.4■□□□□ 0.06
SHMT2-202ENST00000414700 MRNIPQ6NTE8 343 aa15.4■□□□□ 0.06
SHMT2-202ENST00000414700 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.4■□□□□ 0.062e-6■■■■■ 41.4
SHMT2-202ENST00000414700 ENDOVQ8N8Q3 282 aaKnown RBP15.4■□□□□ 0.06
SHMT2-202ENST00000414700 UTP4Q969X6 686 aaKnown RBP15.4■□□□□ 0.06
SHMT2-202ENST00000414700 VPS39Q96JC1 886 aa15.4■□□□□ 0.06
SHMT2-202ENST00000414700 RMDN2Q96LZ7 410 aa15.4■□□□□ 0.06
SHMT2-202ENST00000414700 PLEKHG4BQ96PX9 1271 aa15.4■□□□□ 0.06
SHMT2-202ENST00000414700 KLF6Q99612 283 aaPredicted RBP15.4■□□□□ 0.06
SHMT2-202ENST00000414700 RIOK2Q9BVS4 552 aaKnown RBP15.4■□□□□ 0.06
SHMT2-202ENST00000414700 KLHL14Q9P2G3 628 aa15.4■□□□□ 0.06
SHMT2-202ENST00000414700 TMPRSS11EQ9UL52 423 aa15.4■□□□□ 0.06
SHMT2-202ENST00000414700 SLC30A1Q9Y6M5 507 aa15.4■□□□□ 0.06
SHMT2-202ENST00000414700 IGLON5A6NGN9 336 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 EIF4E1BA6NMX2 242 aaKnown RBP15.39■□□□□ 0.05
SHMT2-202ENST00000414700 GOLGA8RI6L899 631 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 ACADMP11310 421 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 KRT15P19012 456 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 ATP5DP30049 168 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 ACSL1P33121 698 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 GMPRP36959 345 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 LEPRP48357 1165 aaKnown RBP15.39■□□□□ 0.05
SHMT2-202ENST00000414700 DGKEP52429 567 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 LIMK2P53671 638 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 CACNG1Q06432 222 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 LRRC14Q15048 493 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 TYSND1Q2T9J0 566 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 HENMT1Q5T8I9 393 aaKnown RBP15.39■□□□□ 0.05
SHMT2-202ENST00000414700 GRTP1Q5TC63 336 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 TAS2R42Q7RTR8 314 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 SRRM1Q8IYB3 904 aaKnown RBP15.39■□□□□ 0.05
SHMT2-202ENST00000414700 PGBD3Q8N328 593 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 ZNF398Q8TD17 642 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 MGARPQ8TDB4 240 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 CLDN23Q96B33 292 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 DTD2Q96FN9 168 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 SERAC1Q96JX3 654 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 NDNQ99608 321 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 C19orf43Q9BQ61 176 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 FAM83DQ9H4H8 585 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 CAB39LQ9H9S4 337 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 POLMQ9NP87 494 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-202ENST00000414700 APPL1Q9UKG1 709 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 ZFR2Q9UPR6 939 aaKnown RBP15.39■□□□□ 0.05
SHMT2-202ENST00000414700 SIT1Q9Y3P8 196 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 MYO15AQ9UKN7 3530 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 TMEM120BA0PK00 339 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 FADS2P1A8MWK0 482 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 K7ESM1 405 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 WNT9AO14904 365 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 PLRG1O43660 514 aaKnown RBP15.39■□□□□ 0.05
SHMT2-202ENST00000414700 AP1G1O43747 822 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 ALDOAP04075 364 aaKnown RBP15.39■□□□□ 0.05
SHMT2-202ENST00000414700 TPBGLP0DKB5 382 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 PMLP29590 882 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 PXNP49023 591 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-202ENST00000414700 ZBTB16Q05516 673 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 MTAPQ13126 283 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 RBM20Q5T481 1227 aaKnown RBP15.39■□□□□ 0.05
SHMT2-202ENST00000414700 SNX20Q7Z614 316 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 TRABD2AQ86V40 505 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 SERPINA9Q86WD7 417 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 DCLK2Q8N568 766 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 CXorf40AQ8TE69 158 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 KLK6Q92876 244 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 GRAMD1AQ96CP6 724 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 BOCQ9BWV1 1114 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 SPATA16Q9BXB7 569 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 RHOJQ9H4E5 214 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 SCML1Q9UN30 329 aa15.39■□□□□ 0.05
SHMT2-202ENST00000414700 IQANK1A0A1B0GTG1 560 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 AGAP14A8MT82 685 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 PSMD11O00231 422 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 TSPAN6O43657 245 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 PI15O43692 258 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 LZTS3O60299 673 aaPredicted RBP15.38■□□□□ 0.05
SHMT2-202ENST00000414700 KRT37O76014 449 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 KRT38O76015 456 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 SNRPAP09012 282 aaKnown RBP15.38■□□□□ 0.05
SHMT2-202ENST00000414700 OGNP20774 298 aaKnown RBP15.38■□□□□ 0.05
SHMT2-202ENST00000414700 CD151P48509 253 aa15.38■□□□□ 0.05
SHMT2-202ENST00000414700 CSE1LP55060 971 aaKnown RBP15.38■□□□□ 0.05
SHMT2-202ENST00000414700 FGL2Q14314 439 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms