RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 TFDP2Q14188 446 aa15.35■□□□□ 0.05
ACTB-202ENST00000414620 SEPT7Q16181 437 aaKnown RBP15.35■□□□□ 0.05
ACTB-202ENST00000414620 INSCQ1MX18 579 aa15.35■□□□□ 0.05
ACTB-202ENST00000414620 DTX1Q86Y01 620 aa15.35■□□□□ 0.05
ACTB-202ENST00000414620 CCDC50Q8IVM0 306 aa15.35■□□□□ 0.05
ACTB-202ENST00000414620 SLC25A41Q8N5S1 370 aa15.35■□□□□ 0.05
ACTB-202ENST00000414620 CCDC112Q8NEF3 446 aa15.35■□□□□ 0.05
ACTB-202ENST00000414620 EXTL1Q92935 676 aa15.35■□□□□ 0.05
ACTB-202ENST00000414620 GLYATL1Q969I3 302 aa15.35■□□□□ 0.05
ACTB-202ENST00000414620 TEKT5Q96M29 485 aa15.35■□□□□ 0.05
ACTB-202ENST00000414620 DPYSL5Q9BPU6 564 aa15.35■□□□□ 0.05
ACTB-202ENST00000414620 ZSCAN5AQ9BUG6 496 aa15.35■□□□□ 0.05
ACTB-202ENST00000414620 TRIM39Q9HCM9 518 aa15.35■□□□□ 0.05
ACTB-202ENST00000414620 KLHL8Q9P2G9 620 aaPredicted RBP15.35■□□□□ 0.05
ACTB-202ENST00000414620 ATMQ13315 3056 aa15.35■□□□□ 0.05
ACTB-202ENST00000414620 PYCARD-AS1I3L0S3 204 aa15.34■□□□□ 0.05
ACTB-202ENST00000414620 SLC2A4P14672 509 aa15.34■□□□□ 0.05
ACTB-202ENST00000414620 CHRNA4P43681 627 aa15.34■□□□□ 0.05
ACTB-202ENST00000414620 WASHC5Q12768 1159 aa15.34■□□□□ 0.05
ACTB-202ENST00000414620 SQSTM1Q13501 440 aa15.34■□□□□ 0.05
ACTB-202ENST00000414620 TCEAL1Q15170 157 aa15.34■□□□□ 0.05
ACTB-202ENST00000414620 SLC14A2Q15849 920 aa15.34■□□□□ 0.05
ACTB-202ENST00000414620 LINC00303Q3SY05 128 aa15.34■□□□□ 0.05
ACTB-202ENST00000414620 KHDC1Q4VXA5 237 aaKnown RBP15.34■□□□□ 0.05
ACTB-202ENST00000414620 ANKS6Q68DC2 871 aa15.34■□□□□ 0.05
ACTB-202ENST00000414620 CCDC70Q6NSX1 233 aa15.34■□□□□ 0.05
ACTB-202ENST00000414620 TC2NQ8N9U0 490 aa15.34■□□□□ 0.05
ACTB-202ENST00000414620 MED8Q96G25 268 aa15.34■□□□□ 0.05
ACTB-202ENST00000414620 CTRCQ99895 268 aa15.34■□□□□ 0.05
ACTB-202ENST00000414620 ARHGAP9Q9BRR9 750 aa15.34■□□□□ 0.05
ACTB-202ENST00000414620 TRIM5Q9C035 493 aa15.34■□□□□ 0.05
ACTB-202ENST00000414620 RAD18Q9NS91 495 aa15.34■□□□□ 0.05
ACTB-202ENST00000414620 SCHIP1Q9P0W5 487 aaPredicted RBP15.34■□□□□ 0.05
ACTB-202ENST00000414620 NFKBIL1Q9UBC1 381 aaPredicted RBP15.34■□□□□ 0.05
ACTB-202ENST00000414620 CPNE7Q9UBL6 633 aa15.34■□□□□ 0.05
ACTB-202ENST00000414620 SLC23A2Q9UGH3 650 aa15.34■□□□□ 0.05
ACTB-202ENST00000414620 ALG6Q9Y672 507 aa15.34■□□□□ 0.05
ACTB-202ENST00000414620 hCG_1818297A0A087WSY0 165 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 KIR2DS5A0A0G2JLQ3 304 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 A0A0G2JNG1 304 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 PDZK1P1A8MUH7 402 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 KIR2DS3K7RE56 304 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 UGT1A3P35503 534 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 NR2C2P49116 596 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 ATP1A2P50993 1020 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 WNT3AP56704 352 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 KIR2DS5Q14953 304 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 TAZQ16635 292 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 KDELC1Q6UW63 502 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 BZW1Q7L1Q6 419 aaKnown RBP15.33■□□□□ 0.04
ACTB-202ENST00000414620 LRRTM4Q86VH4 590 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 IL22RA1Q8N6P7 574 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 EXD3Q8N9H8 876 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 ZSCAN1Q8NBB4 408 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 IPMKQ8NFU5 416 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 GDAP1Q8TB36 358 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 HTR3CQ8WXA8 447 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 KRT35Q92764 455 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 P3H4Q92791 437 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 NKD1Q969G9 470 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 SH3KBP1Q96B97 665 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 RNF31Q96EP0 1072 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 PLEKHG4BQ96PX9 1271 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 DDA1Q9BW61 102 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 TRIM10Q9UDY6 481 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 FAM153AQ9UHL3 310 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 TMPRSS11EQ9UL52 423 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 PCDHGA3Q9Y5H0 932 aa15.33■□□□□ 0.04
ACTB-202ENST00000414620 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.32■□□□□ 0.04
ACTB-202ENST00000414620 KMOO15229 486 aa15.32■□□□□ 0.04
ACTB-202ENST00000414620 GPR39O43194 453 aa15.32■□□□□ 0.04
ACTB-202ENST00000414620 BUD23O43709 281 aaKnown RBP15.32■□□□□ 0.04
ACTB-202ENST00000414620 RAD1O60671 282 aa15.32■□□□□ 0.04
ACTB-202ENST00000414620 ZNF7P17097 686 aaPredicted RBP15.32■□□□□ 0.04
ACTB-202ENST00000414620 TYRP1P17643 537 aa15.32■□□□□ 0.04
ACTB-202ENST00000414620 GFERP55789 205 aa15.32■□□□□ 0.04
ACTB-202ENST00000414620 UBE2IP63279 158 aaKnown RBP15.32■□□□□ 0.04
ACTB-202ENST00000414620 ATP13A5Q4VNC0 1218 aa15.32■□□□□ 0.04
ACTB-202ENST00000414620 TFDP3Q5H9I0 405 aa15.32■□□□□ 0.04
ACTB-202ENST00000414620 SIRPB2Q5JXA9 342 aa15.32■□□□□ 0.04
ACTB-202ENST00000414620 DCAF12Q5T6F0 453 aa15.32■□□□□ 0.04
ACTB-202ENST00000414620 PDPK2PQ6A1A2 396 aa15.32■□□□□ 0.04
ACTB-202ENST00000414620 PID1Q7Z2X4 250 aa15.32■□□□□ 0.04
ACTB-202ENST00000414620 TRIM48Q8IWZ4 208 aa15.32■□□□□ 0.04
ACTB-202ENST00000414620 ZNF567Q8N184 647 aa15.32■□□□□ 0.04
ACTB-202ENST00000414620 BMPERQ8N8U9 685 aa15.32■□□□□ 0.04
ACTB-202ENST00000414620 OXNAD1Q96HP4 312 aaPredicted RBP15.32■□□□□ 0.04
ACTB-202ENST00000414620 MRGPRX2Q96LB1 330 aa15.32■□□□□ 0.04
ACTB-202ENST00000414620 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.32■□□□□ 0.04
ACTB-202ENST00000414620 B3GNT4Q9C0J1 378 aa15.32■□□□□ 0.04
ACTB-202ENST00000414620 C10orf88Q9H8K7 445 aa15.32■□□□□ 0.04
ACTB-202ENST00000414620 APMAPQ9HDC9 416 aa15.32■□□□□ 0.04
ACTB-202ENST00000414620 PCDHA13Q9Y5I0 950 aa15.32■□□□□ 0.04
ACTB-202ENST00000414620 OR5K4A6NMS3 321 aa15.31■□□□□ 0.04
ACTB-202ENST00000414620 B4E171 279 aa15.31■□□□□ 0.04
ACTB-202ENST00000414620 CHUKO15111 745 aa15.31■□□□□ 0.04
ACTB-202ENST00000414620 CDK14O94921 469 aa15.31■□□□□ 0.04
ACTB-202ENST00000414620 ZRANB2O95218 330 aaKnown RBP eCLIP15.31■□□□□ 0.041e-16■■■□□ 16.5
ACTB-202ENST00000414620 VIPP01282 170 aa15.31■□□□□ 0.04
ACTB-202ENST00000414620 FAM87AP0C7U9 286 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms