RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 LPCAT1Q8NF37 534 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 KLHL6Q8WZ60 621 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 PCDH9Q9HC56 1237 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 KLC4Q9NSK0 619 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 RBM22Q9NW64 420 aaKnown RBP eCLIP11.99□□□□□ -0.49
LIMS2-210ENST00000413578 DTLQ9NZJ0 730 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 ZNF624Q9P2J8 865 aaPredicted RBP11.99□□□□□ -0.49
LIMS2-210ENST00000413578 NFKBIL1Q9UBC1 381 aaPredicted RBP11.99□□□□□ -0.49
LIMS2-210ENST00000413578 MYO1AQ9UBC5 1043 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 EPHA6Q9UF33 1036 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 SLC23A2Q9UGH3 650 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 TLK1Q9UKI8 766 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 PCDHB3Q9Y5E6 796 aa11.99□□□□□ -0.49
LIMS2-210ENST00000413578 RP1L1Q8IWN7 2480 aaPredicted RBP11.99□□□□□ -0.49
LIMS2-210ENST00000413578 ANKRD66B4E2M5 251 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 GPR89AB7ZAQ6 455 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 KIF1CO43896 1103 aaKnown RBP11.98□□□□□ -0.49
LIMS2-210ENST00000413578 CREG1O75629 220 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 KIAA0754O94854 1291 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 NDUFA10O95299 355 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 TIAF1O95411 115 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 GPR89BP0CG08 455 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 BRAFP15056 766 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 CA4P22748 312 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 CCNCP24863 283 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 CAPZBP47756 277 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 UQCRFS1P47985 274 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 DCDC1P59894 354 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 KLHL30Q0D2K2 578 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 LAMB3Q13751 1172 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 DPYSL3Q14195 570 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 STX1AQ16623 288 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 IFI16Q16666 785 aaKnown RBP11.98□□□□□ -0.49
LIMS2-210ENST00000413578 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.98□□□□□ -0.49
LIMS2-210ENST00000413578 C4orf17Q53FE4 359 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 ZNF648Q5T619 568 aaPredicted RBP11.98□□□□□ -0.49
LIMS2-210ENST00000413578 HGSNATQ68CP4 663 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 CAPRIN2Q6IMN6 1127 aaKnown RBP11.98□□□□□ -0.49
LIMS2-210ENST00000413578 TIGD7Q6NT04 549 aaPredicted RBP11.98□□□□□ -0.49
LIMS2-210ENST00000413578 ABRAXAS1Q6UWZ7 409 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 ADGRG6Q86SQ4 1221 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 ATCAYQ86WG3 371 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 ZNF547Q8IVP9 402 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.98□□□□□ -0.49
LIMS2-210ENST00000413578 TEX19Q8NA77 164 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 RSC1A1Q92681 617 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 FAF2Q96CS3 445 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 RNF31Q96EP0 1072 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 BTBD6Q96KE9 485 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 OR6C1Q96RD1 312 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 TRIB3Q96RU7 358 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 BRD8Q9H0E9 1235 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 OR2AG1Q9H205 316 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 POT1Q9NUX5 634 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 PKD2L2Q9NZM6 624 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 KCND3Q9UK17 655 aa11.98□□□□□ -0.49
LIMS2-210ENST00000413578 SPAG6O75602 509 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 TYRP1P17643 537 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 SEPHS1P49903 392 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 DNASE1L3Q13609 305 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 ZNF569Q5MCW4 686 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 CCDC183Q5T5S1 534 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 HIST2H2BCQ6DN03 193 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 WASH2PQ6VEQ5 465 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 C11orf96Q7Z7L8 435 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 CNTD1Q8N815 330 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 GALNT11Q8NCW6 608 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 GPR26Q8NDV2 337 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 CT55Q8WUE5 264 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 STAMBPL1Q96FJ0 436 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 SLC41A2Q96JW4 573 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 TGM7Q96PF1 710 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 ZNF670Q9BS34 389 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 MLPHQ9BV36 600 aaPredicted RBP11.97□□□□□ -0.49
LIMS2-210ENST00000413578 TRIM55Q9BYV6 548 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 RAB33BQ9H082 229 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 THAP2Q9H0W7 228 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 TRIM39Q9HCM9 518 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 SLC40A1Q9NP59 571 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 ARFGAP3Q9NP61 516 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 MLXIPLQ9NP71 852 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 LHX9Q9NQ69 397 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 WASH6PQ9NQA3 447 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 GTF3C3Q9Y5Q9 886 aa11.97□□□□□ -0.49
LIMS2-210ENST00000413578 CDC14CA4D256 554 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 C21orf140B9A014 251 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 DNAJB5O75953 348 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 VIPP01282 170 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 CYP1A2P05177 515 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 SKILP12757 684 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 ZNF7P17097 686 aaPredicted RBP11.96□□□□□ -0.49
LIMS2-210ENST00000413578 NELFEP18615 380 aaKnown RBP11.96□□□□□ -0.49
LIMS2-210ENST00000413578 CD86P42081 329 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 NOP2P46087 812 aaKnown RBP11.96□□□□□ -0.49
LIMS2-210ENST00000413578 GBE1Q04446 702 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 SLC10A2Q12908 348 aaPredicted RBP11.96□□□□□ -0.49
LIMS2-210ENST00000413578 SEMA5AQ13591 1074 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 KRT81Q14533 505 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 ATP13A4Q4VNC1 1196 aa11.96□□□□□ -0.49
LIMS2-210ENST00000413578 KHDC1Q4VXA5 237 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms