RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 MYL2P10916 166 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 ALOX15P16050 662 aaPredicted RBP17.03■□□□□ 0.32
PTPRC-206ENST00000413409 PSMA3P25788 255 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 SLC1A6P48664 564 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 SLC7A9P82251 487 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 IRF9Q00978 393 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 CTBP1Q13363 440 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 KRT72Q14CN4 511 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 RALGPS1Q5JS13 557 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 EOGTQ5NDL2 527 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 ZYG11AQ6WRX3 759 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 SLC36A4Q6YBV0 504 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 ZCCHC23Q6ZST2 131 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 KDELC2Q7Z4H8 507 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 MTDHQ86UE4 582 aaKnown RBP17.03■□□□□ 0.32
PTPRC-206ENST00000413409 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.03■□□□□ 0.32
PTPRC-206ENST00000413409 ACVR1CQ8NER5 493 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 GPR150Q8NGU9 434 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 BAHD1Q8TBE0 780 aaPredicted RBP17.03■□□□□ 0.32
PTPRC-206ENST00000413409 BRSK1Q8TDC3 778 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 PPP4R1Q8TF05 950 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 TSPAN17Q96FV3 270 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 HSPA12BQ96MM6 686 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 NUDCD1Q96RS6 583 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 IL21RQ9HBE5 538 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.03■□□□□ 0.32
PTPRC-206ENST00000413409 HEY2Q9UBP5 337 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 LNPEPQ9UIQ6 1025 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 LSM7Q9UK45 103 aaKnown RBP17.03■□□□□ 0.32
PTPRC-206ENST00000413409 ZNF510Q9Y2H8 683 aa17.03■□□□□ 0.32
PTPRC-206ENST00000413409 G3V2L1 256 aa17.02■□□□□ 0.32
PTPRC-206ENST00000413409 TRAFD1O14545 582 aaPredicted RBP17.02■□□□□ 0.32
PTPRC-206ENST00000413409 LUC7L3O95232 432 aaKnown RBP17.02■□□□□ 0.32
PTPRC-206ENST00000413409 KAT7O95251 611 aa17.02■□□□□ 0.32
PTPRC-206ENST00000413409 NFATC1O95644 943 aa17.02■□□□□ 0.32
PTPRC-206ENST00000413409 CYP17A1P05093 508 aa17.02■□□□□ 0.32
PTPRC-206ENST00000413409 F7P08709 466 aaPredicted RBP17.02■□□□□ 0.32
PTPRC-206ENST00000413409 GABRG2P18507 467 aa17.02■□□□□ 0.32
PTPRC-206ENST00000413409 OGNP20774 298 aaKnown RBP17.02■□□□□ 0.32
PTPRC-206ENST00000413409 RASSF2P50749 326 aa17.02■□□□□ 0.32
PTPRC-206ENST00000413409 ABCE1P61221 599 aaKnown RBP17.02■□□□□ 0.32
PTPRC-206ENST00000413409 GRIK2Q13002 908 aa17.02■□□□□ 0.32
PTPRC-206ENST00000413409 RNF219Q5W0B1 726 aaPredicted RBP17.02■□□□□ 0.32
PTPRC-206ENST00000413409 C12orf40Q86WS4 652 aa17.02■□□□□ 0.32
PTPRC-206ENST00000413409 CILP2Q8IUL8 1156 aa17.02■□□□□ 0.32
PTPRC-206ENST00000413409 WDR75Q8IWA0 830 aaKnown RBP17.02■□□□□ 0.32
PTPRC-206ENST00000413409 CENPLQ8N0S6 344 aaPredicted RBP17.02■□□□□ 0.32
PTPRC-206ENST00000413409 CPXM2Q8N436 756 aa17.02■□□□□ 0.32
PTPRC-206ENST00000413409 PIWIL2Q8TC59 973 aaKnown RBP17.02■□□□□ 0.32
PTPRC-206ENST00000413409 SETD7Q8WTS6 366 aaKnown RBP17.02■□□□□ 0.32
PTPRC-206ENST00000413409 STYXQ8WUJ0 223 aa17.02■□□□□ 0.32
PTPRC-206ENST00000413409 ELMO2Q96JJ3 720 aa17.02■□□□□ 0.32
PTPRC-206ENST00000413409 TMEM237Q96Q45 408 aa17.02■□□□□ 0.32
PTPRC-206ENST00000413409 MUC3BQ9H195 1237 aa17.02■□□□□ 0.32
PTPRC-206ENST00000413409 ZNF358Q9NW07 568 aa17.02■□□□□ 0.32
PTPRC-206ENST00000413409 SMPD4Q9NXE4 827 aa17.02■□□□□ 0.32
PTPRC-206ENST00000413409 ACOT9Q9Y305 439 aa17.02■□□□□ 0.32
PTPRC-206ENST00000413409 CPQQ9Y646 472 aa17.02■□□□□ 0.32
PTPRC-206ENST00000413409 TRAV19A0A0A6YYK7 116 aa17.01■□□□□ 0.31
PTPRC-206ENST00000413409 PHGDHO43175 533 aaKnown RBP17.01■□□□□ 0.31
PTPRC-206ENST00000413409 TBL1XO60907 577 aa17.01■□□□□ 0.31
PTPRC-206ENST00000413409 ZMPSTE24O75844 475 aa17.01■□□□□ 0.31
PTPRC-206ENST00000413409 TCF3P15923 654 aa17.01■□□□□ 0.31
PTPRC-206ENST00000413409 HK2P52789 917 aa17.01■□□□□ 0.31
PTPRC-206ENST00000413409 SLC12A2P55011 1212 aa17.01■□□□□ 0.31
PTPRC-206ENST00000413409 PRAMEP78395 509 aa17.01■□□□□ 0.31
PTPRC-206ENST00000413409 ZBTB16Q05516 673 aa17.01■□□□□ 0.31
PTPRC-206ENST00000413409 ASPHQ12797 758 aa17.01■□□□□ 0.31
PTPRC-206ENST00000413409 CYTH1Q15438 398 aa17.01■□□□□ 0.31
PTPRC-206ENST00000413409 TBCCQ15814 346 aa17.01■□□□□ 0.31
PTPRC-206ENST00000413409 HSF5Q4G112 596 aaPredicted RBP17.01■□□□□ 0.31
PTPRC-206ENST00000413409 INO80DQ53TQ3 878 aaPredicted RBP17.01■□□□□ 0.31
PTPRC-206ENST00000413409 FBXW10Q5XX13 1052 aa17.01■□□□□ 0.31
PTPRC-206ENST00000413409 LRRC8EQ6NSJ5 796 aa17.01■□□□□ 0.31
PTPRC-206ENST00000413409 CYB5D1Q6P9G0 228 aa17.01■□□□□ 0.31
PTPRC-206ENST00000413409 DCAF4L2Q8NA75 395 aa17.01■□□□□ 0.31
PTPRC-206ENST00000413409 STON2Q8WXE9 905 aa17.01■□□□□ 0.31
PTPRC-206ENST00000413409 RAB3IPQ96QF0 476 aaPredicted RBP17.01■□□□□ 0.31
PTPRC-206ENST00000413409 SORT1Q99523 831 aa17.01■□□□□ 0.31
PTPRC-206ENST00000413409 TDRD1Q9BXT4 1180 aaKnown RBP17.01■□□□□ 0.31
PTPRC-206ENST00000413409 C20orf27Q9GZN8 174 aa17.01■□□□□ 0.31
PTPRC-206ENST00000413409 NOD2Q9HC29 1040 aa17.01■□□□□ 0.31
PTPRC-206ENST00000413409 OXSMQ9NWU1 459 aa17.01■□□□□ 0.31
PTPRC-206ENST00000413409 DNAJC16Q9Y2G8 782 aa17.01■□□□□ 0.31
PTPRC-206ENST00000413409 KNTC1P50748 2209 aa17.01■□□□□ 0.31
PTPRC-206ENST00000413409 TTC24A2A3L6 582 aaPredicted RBP17■□□□□ 0.31
PTPRC-206ENST00000413409 PYCARD-AS1I3L0S3 204 aa17■□□□□ 0.31
PTPRC-206ENST00000413409 HGSO14964 777 aaPredicted RBP17■□□□□ 0.31
PTPRC-206ENST00000413409 TSPAN3O60637 253 aa17■□□□□ 0.31
PTPRC-206ENST00000413409 CCDC22O60826 627 aa17■□□□□ 0.31
PTPRC-206ENST00000413409 TRIM13O60858 407 aa17■□□□□ 0.31
PTPRC-206ENST00000413409 TMCC1O94876 653 aa17■□□□□ 0.31
PTPRC-206ENST00000413409 KLHL2O95198 593 aa17■□□□□ 0.31
PTPRC-206ENST00000413409 CRTAMO95727 393 aa17■□□□□ 0.31
PTPRC-206ENST00000413409 HDCP19113 662 aa17■□□□□ 0.31
PTPRC-206ENST00000413409 GLDCP23378 1020 aa17■□□□□ 0.31
PTPRC-206ENST00000413409 MAOBP27338 520 aa17■□□□□ 0.31
PTPRC-206ENST00000413409 SERPINB3P29508 390 aa17■□□□□ 0.31
PTPRC-206ENST00000413409 SLC26A3P40879 764 aa17■□□□□ 0.31
PTPRC-206ENST00000413409 RGRP47804 291 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms