RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 DDHD1Q8NEL9 900 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 ARMC2Q8NEN0 867 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 GIMAP7Q8NHV1 300 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 CD200R1Q8TD46 325 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 KCTD4Q8WVF5 259 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 CKAP2Q8WWK9 683 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 AP2M1Q96CW1 435 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 TSNARE1Q96NA8 513 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 VPS35Q96QK1 796 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 COPS8Q99627 209 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 PAIP2Q9BPZ3 127 aaKnown RBP6.59□□□□□ -1.35
VPS41-204ENST00000413141 CLPBQ9H078 707 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 ABCG8Q9H221 673 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 IGSF5Q9NSI5 407 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 RYDENQ9NUL5 291 aaKnown RBP6.59□□□□□ -1.35
VPS41-204ENST00000413141 ZNF358Q9NW07 568 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 ZDHHC3Q9NYG2 299 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 TAS2R13Q9NYV9 303 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 TMEM216Q9P0N5 145 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 DCDC2Q9UHG0 476 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 FZD4Q9ULV1 537 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 SCML1Q9UN30 329 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 COQ6Q9Y2Z9 468 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 ACOT9Q9Y305 439 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 PCDHB1Q9Y5F3 818 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 OAS3Q9Y6K5 1087 aaKnown RBP6.59□□□□□ -1.35
VPS41-204ENST00000413141 PRSS21Q9Y6M0 314 aa6.59□□□□□ -1.35
VPS41-204ENST00000413141 KRBA1A5PL33 1030 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 SRRM3A6NNA2 597 aaPredicted RBP6.58□□□□□ -1.36
VPS41-204ENST00000413141 IQCF5A8MTL0 148 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 CHURC1-FNTBB4DL54 471 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 E5RI56 91 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 H3BMM5 538 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 TK2O00142 265 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 LZTS3O60299 673 aaPredicted RBP6.58□□□□□ -1.36
VPS41-204ENST00000413141 DNAJC6O75061 913 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 KLHL2O95198 593 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 APOA4P06727 396 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 PYGLP06737 847 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 LTA4HP09960 611 aaKnown RBP6.58□□□□□ -1.36
VPS41-204ENST00000413141 CCDC166P0CW27 439 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 GABRG2P18507 467 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 AKT1P31749 480 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 NSG1P42857 185 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 GLRBP48167 497 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 CLCN7P51798 805 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 KPNA2P52292 529 aaKnown RBP6.58□□□□□ -1.36
VPS41-204ENST00000413141 STARD6P59095 220 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 DPTQ07507 201 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 LRRC32Q14392 662 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 CSHL1Q14406 222 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 PCLAFQ15004 111 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 AGERQ15109 404 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 TERF2Q15554 542 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 CRY1Q16526 586 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 SETMARQ53H47 684 aaPredicted RBP6.58□□□□□ -1.36
VPS41-204ENST00000413141 TECRLQ5HYJ1 363 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 SEL1L3Q68CR1 1132 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 PTRHD1Q6GMV3 140 aaKnown RBP6.58□□□□□ -1.36
VPS41-204ENST00000413141 RAET1GQ6H3X3 334 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 KIAA1161Q6NSJ0 714 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 LRRC8EQ6NSJ5 796 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 KIAA1324Q6UXG2 1013 aaKnown RBP6.58□□□□□ -1.36
VPS41-204ENST00000413141 MACC1Q6ZN28 852 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 RGS9BPQ6ZS82 235 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 USP30Q70CQ3 517 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 KBTBD6Q86V97 674 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 PHYKPLQ8IUZ5 450 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 SPNS2Q8IVW8 549 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 PELI3Q8N2H9 469 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 SYNPOQ8N3V7 929 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 SIDT2Q8NBJ9 832 aaKnown RBP6.58□□□□□ -1.36
VPS41-204ENST00000413141 LKAAEAR1Q8TD35 194 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 GANCQ8TET4 914 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 NAT14Q8WUY8 206 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 HEXDCQ8WVB3 486 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 ANKRD49Q8WVL7 239 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 BTN2A2Q8WVV5 523 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 GLYATL1Q969I3 302 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 FAM136AQ96C01 138 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 NXNL1Q96CM4 212 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 SIPA1Q96FS4 1042 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 MRGPRX1Q96LB2 322 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 UBXN10Q96LJ8 280 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 MAGEB18Q96M61 343 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 GPR78Q96P69 363 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 ZNF317Q96PQ6 595 aaPredicted RBP6.58□□□□□ -1.36
VPS41-204ENST00000413141 GPR21Q99679 349 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 SLC30A3Q99726 388 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 MECRQ9BV79 373 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 NMRAL1Q9HBL8 299 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 LTB4R2Q9NPC1 389 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 FBXL12Q9NXK8 326 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 GALPQ9UBC7 116 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 COPG2Q9UBF2 871 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 XPR1Q9UBH6 696 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 WNT16Q9UBV4 365 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 TRMT6Q9UJA5 497 aaKnown RBP6.58□□□□□ -1.36
VPS41-204ENST00000413141 FBXL21Q9UKT6 434 aa6.58□□□□□ -1.36
VPS41-204ENST00000413141 MRPS17Q9Y2R5 130 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms