RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 SLC25A17O43808 307 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 AKAP3O75969 853 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 SNX4O95219 450 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 FSHBP01225 129 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 ALPPP05187 535 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 FAM86B2P0C5J1 330 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 ALPPL2P10696 532 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 RPS2P15880 293 aaKnown RBP4.51□□□□□ -1.69
BRCA1-204ENST00000412061 PFKFB1P16118 471 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 GJA1P17302 382 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 ADRA2CP18825 462 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 HOXA7P31268 230 aaPredicted RBP4.51□□□□□ -1.69
BRCA1-204ENST00000412061 ST8SIA6P61647 398 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 TGFB2P61812 414 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 KCNJ10P78508 379 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 HSF1Q00613 529 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 COL10A1Q03692 680 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 ZBTB16Q05516 673 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 GRIK3Q13003 919 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 CDONQ4KMG0 1287 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 RARS2Q5T160 578 aaKnown RBP4.51□□□□□ -1.69
BRCA1-204ENST00000412061 VWA5B1Q5TIE3 1220 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 LRRC8EQ6NSJ5 796 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 DZIP1Q86YF9 867 aaKnown RBP4.51□□□□□ -1.69
BRCA1-204ENST00000412061 ARID3BQ8IVW6 561 aaPredicted RBP4.51□□□□□ -1.69
BRCA1-204ENST00000412061 MCEMP1Q8IX19 187 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 CLYBLQ8N0X4 340 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 ZCCHC9Q8N567 271 aaKnown RBP4.51□□□□□ -1.69
BRCA1-204ENST00000412061 BOLLQ8N9W6 283 aaKnown RBP4.51□□□□□ -1.69
BRCA1-204ENST00000412061 DENND6BQ8NEG7 585 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 LPCAT1Q8NF37 534 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 DBF4BQ8NFT6 615 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 OR7G3Q8NG95 312 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 OR10S1Q8NGN2 331 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 OR8K5Q8NH50 307 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 OR14L1PQ8NHC6 308 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 RASSF8Q8NHQ8 419 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 IP6K1Q92551 441 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 CHFRQ96EP1 664 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 KATNB1Q9BVA0 655 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 RTN4RQ9BZR6 473 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 SPATC1LQ9H0A9 340 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 DPH5Q9H2P9 285 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 NOL11Q9H8H0 719 aaKnown RBP4.51□□□□□ -1.69
BRCA1-204ENST00000412061 MLXIPLQ9NP71 852 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 AATFQ9NY61 560 aaKnown RBP eCLIP4.51□□□□□ -1.69
BRCA1-204ENST00000412061 ERAP1Q9NZ08 941 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 TRPC4Q9UBN4 977 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 TSPYL4Q9UJ04 414 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 HACL1Q9UJ83 578 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 FBXO4Q9UKT5 387 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 FBXW2Q9UKT8 454 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 ITGA11Q9UKX5 1188 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 WBP11Q9Y2W2 641 aaKnown RBP4.51□□□□□ -1.69
BRCA1-204ENST00000412061 CLCA3PQ9Y6N3 262 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 ACEP12821 1306 aa4.51□□□□□ -1.69
BRCA1-204ENST00000412061 A0A087WV48 116 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 CBY3A6NI87 242 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 LRRC3CA6NJW4 275 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 LINC01548A6NM66 108 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 MSI1O43347 362 aaKnown RBP4.5□□□□□ -1.69
BRCA1-204ENST00000412061 RIPK2O43353 540 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 RSL1D1O76021 490 aaKnown RBP4.5□□□□□ -1.69
BRCA1-204ENST00000412061 LETM1O95202 739 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-204ENST00000412061 NFATC1O95644 943 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 HIST1H2ABP04908 130 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 MMP2P08253 660 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 VIMP08670 466 aaKnown RBP4.5□□□□□ -1.69
BRCA1-204ENST00000412061 CD63P08962 238 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 ITIH1P19827 911 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 HIST1H2ADP20671 130 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 GPTP24298 496 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 RPA1P27694 616 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 ACADLP28330 430 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 PCGF2P35227 344 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 CYP2J2P51589 502 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 ARSEP51690 589 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 GMFBP60983 142 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 TFF2Q03403 129 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 GFPT1Q06210 699 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-204ENST00000412061 ACSM1Q08AH1 577 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 GALNT3Q14435 633 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 ZNF268Q14587 947 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-204ENST00000412061 SHBQ15464 509 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 SOWAHCQ53LP3 525 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-204ENST00000412061 TMEM268Q5VZI3 342 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 PLA2G4FQ68DD2 849 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 DHRS7BQ6IAN0 325 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-204ENST00000412061 MEX3BQ6ZN04 569 aaKnown RBP4.5□□□□□ -1.69
BRCA1-204ENST00000412061 RGS9BPQ6ZS82 235 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 C11orf57Q6ZUT1 292 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-204ENST00000412061 HIST3H2AQ7L7L0 130 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 TMEM110Q86TL2 294 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 LDB1Q86U70 411 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-204ENST00000412061 TBC1D26Q86UD7 250 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 HAPLN4Q86UW8 402 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 ADIPOR2Q86V24 386 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 AFAP1Q8N556 730 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 C8orf58Q8NAV2 365 aa4.5□□□□□ -1.69
BRCA1-204ENST00000412061 UXS1Q8NBZ7 420 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms