RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 PCDHGA4Q9Y5G9 962 aa14.34□□□□□ -0.11
MCF2L-210ENST00000409954 PCYT1BQ9Y5K3 369 aaPredicted RBP14.34□□□□□ -0.11
MCF2L-210ENST00000409954 MGAQ8IWI9 3026 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 SPOPO43791 374 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 CDK14O94921 469 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 ZRANB2O95218 330 aaKnown RBP eCLIP14.33□□□□□ -0.12
MCF2L-210ENST00000409954 COMTP21964 271 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 MAP4P27816 1152 aaKnown RBP14.33□□□□□ -0.12
MCF2L-210ENST00000409954 CSF2RBP32927 897 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 HADHBP55084 474 aaKnown RBP14.33□□□□□ -0.12
MCF2L-210ENST00000409954 PCSK7Q16549 785 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 TAZQ16635 292 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 MFSD7Q6UXD7 560 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 CEACAM20Q6UY09 585 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 ADGRG6Q86SQ4 1221 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 VASH2Q86V25 355 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 LRRTM4Q86VH4 590 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 ZNF761Q86XN6 746 aaPredicted RBP14.33□□□□□ -0.12
MCF2L-210ENST00000409954 FAM129CQ86XR2 697 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 RCOR2Q8IZ40 523 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 CACNA2D3Q8IZS8 1091 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 SPATA22Q8NHS9 363 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 EXTL1Q92935 676 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 PLEKHG4BQ96PX9 1271 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 SPRY4Q9C004 299 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 TRIT1Q9H3H1 467 aaKnown RBP14.33□□□□□ -0.12
MCF2L-210ENST00000409954 TSPY26PQ9H489 355 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 TMEM9Q9P0T7 183 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 ZNF711Q9Y462 761 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 ADGRG1Q9Y653 693 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 ALG6Q9Y672 507 aa14.33□□□□□ -0.12
MCF2L-210ENST00000409954 LOC285095A0A1B0GVY8 99 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 LILRA5A6NI73 299 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 A8MU76 341 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 CST8O60676 142 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 MT-CYBP00156 380 aaPredicted RBP14.32□□□□□ -0.12
MCF2L-210ENST00000409954 VIPP01282 170 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 PIRTP0C851 137 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 TNNT1P13805 278 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 ZNF7P17097 686 aaPredicted RBP14.32□□□□□ -0.12
MCF2L-210ENST00000409954 BPIP17213 487 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 VCLP18206 1134 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 IDSP22304 550 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 HMGCLP35914 325 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 CDKN2BP42772 138 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 MAGEA1P43355 309 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 NOP2P46087 812 aaKnown RBP14.32□□□□□ -0.12
MCF2L-210ENST00000409954 ARSDP51689 593 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 DYNLT1P63172 113 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 SRSF6Q13247 344 aaKnown RBP14.32□□□□□ -0.12
MCF2L-210ENST00000409954 TBR1Q16650 682 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 SNAP47Q5SQN1 464 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 ABRAXAS1Q6UWZ7 409 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 WASH2PQ6VEQ5 465 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 PID1Q7Z2X4 250 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 RBM12BQ8IXT5 1001 aaKnown RBP14.32□□□□□ -0.12
MCF2L-210ENST00000409954 BMPERQ8N8U9 685 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 P3H4Q92791 437 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 TTC25Q96NG3 672 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 VPS35Q96QK1 796 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 TIMM29Q9BSF4 260 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 SLC12A9Q9BXP2 914 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 CEP41Q9BYV8 373 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 FAM117AQ9C073 453 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 WASH6PQ9NQA3 447 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 PRDM8Q9NQV8 689 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 HACD3Q9P035 362 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 PILRAQ9UKJ1 303 aa14.32□□□□□ -0.12
MCF2L-210ENST00000409954 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.32□□□□□ -0.12
MCF2L-210ENST00000409954 HELZ2Q9BYK8 2649 aaKnown RBP14.32□□□□□ -0.12
MCF2L-210ENST00000409954 TOX3O15405 576 aaPredicted RBP14.31□□□□□ -0.12
MCF2L-210ENST00000409954 PSTPIP1O43586 416 aa14.31□□□□□ -0.12
MCF2L-210ENST00000409954 RAD1O60671 282 aa14.31□□□□□ -0.12
MCF2L-210ENST00000409954 PPFIA2O75334 1257 aa14.31□□□□□ -0.12
MCF2L-210ENST00000409954 PMPCBO75439 489 aa14.31□□□□□ -0.12
MCF2L-210ENST00000409954 AMD1P17707 334 aa14.31□□□□□ -0.12
MCF2L-210ENST00000409954 PTPN3P26045 913 aa14.31□□□□□ -0.12
MCF2L-210ENST00000409954 UBE2IP63279 158 aaKnown RBP14.31□□□□□ -0.12
MCF2L-210ENST00000409954 TMEM115Q12893 351 aaPredicted RBP14.31□□□□□ -0.12
MCF2L-210ENST00000409954 PRKD1Q15139 912 aaPredicted RBP14.31□□□□□ -0.12
MCF2L-210ENST00000409954 INSCQ1MX18 579 aa14.31□□□□□ -0.12
MCF2L-210ENST00000409954 TFDP3Q5H9I0 405 aa14.31□□□□□ -0.12
MCF2L-210ENST00000409954 ALS2CLQ60I27 953 aa14.31□□□□□ -0.12
MCF2L-210ENST00000409954 ANKS6Q68DC2 871 aa14.31□□□□□ -0.12
MCF2L-210ENST00000409954 TMEM26Q6ZUK4 368 aa14.31□□□□□ -0.12
MCF2L-210ENST00000409954 TRIM48Q8IWZ4 208 aa14.31□□□□□ -0.12
MCF2L-210ENST00000409954 NLGN4XQ8N0W4 816 aa14.31□□□□□ -0.12
MCF2L-210ENST00000409954 NLGN4YQ8NFZ3 816 aaPredicted RBP14.31□□□□□ -0.12
MCF2L-210ENST00000409954 JPH3Q8WXH2 748 aaPredicted RBP14.31□□□□□ -0.12
MCF2L-210ENST00000409954 RTP4Q96DX8 246 aa14.31□□□□□ -0.12
MCF2L-210ENST00000409954 CATSPER2Q96P56 530 aa14.31□□□□□ -0.12
MCF2L-210ENST00000409954 FCRL5Q96RD9 977 aa14.31□□□□□ -0.12
MCF2L-210ENST00000409954 OSGEPL1Q9H4B0 414 aa14.31□□□□□ -0.12
MCF2L-210ENST00000409954 LUC7LQ9NQ29 371 aaKnown RBP14.31□□□□□ -0.12
MCF2L-210ENST00000409954 STARD5Q9NSY2 213 aa14.31□□□□□ -0.12
MCF2L-210ENST00000409954 GEMIN8Q9NWZ8 242 aaKnown RBP14.31□□□□□ -0.12
MCF2L-210ENST00000409954 SLC23A2Q9UGH3 650 aa14.31□□□□□ -0.12
MCF2L-210ENST00000409954 TRHDEQ9UKU6 1024 aa14.31□□□□□ -0.12
MCF2L-210ENST00000409954 HEMK1Q9Y5R4 338 aaPredicted RBP14.31□□□□□ -0.12
MCF2L-210ENST00000409954 DNMT3AQ9Y6K1 912 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms