RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 TRMT5Q32P41 509 aaKnown RBP7.45□□□□□ -1.22
CXCR4-202ENST00000409817 SLC9B1Q4ZJI4 515 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 LYPLAL1Q5VWZ2 237 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 TMEM207Q6UWW9 146 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 SPATA31D4Q6ZUB0 917 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 LDB1Q86U70 411 aaPredicted RBP7.45□□□□□ -1.22
CXCR4-202ENST00000409817 BBS7Q8IWZ6 715 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 CBARPQ8N350 705 aaPredicted RBP7.45□□□□□ -1.22
CXCR4-202ENST00000409817 CEP70Q8NHQ1 597 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 ACTRT2Q8TDY3 377 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 AGAP11Q8TF27 550 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 ANKRD49Q8WVL7 239 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 BHMTQ93088 406 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 GTPBP3Q969Y2 492 aaKnown RBP7.45□□□□□ -1.22
CXCR4-202ENST00000409817 KIAA1191Q96A73 305 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 OTUB2Q96DC9 234 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 LYSMD1Q96S90 227 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 CORO1BQ9BR76 489 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 ERVK-6Q9BXR3 956 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 SLC46A2Q9BY10 475 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 GPR63Q9BZJ6 419 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 CEP44Q9C0F1 390 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 MTIF3Q9H2K0 278 aaKnown RBP7.45□□□□□ -1.22
CXCR4-202ENST00000409817 POLR3BQ9NW08 1133 aaPredicted RBP7.45□□□□□ -1.22
CXCR4-202ENST00000409817 NDE1Q9NXR1 346 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 NOP53Q9NZM5 478 aaKnown RBP7.45□□□□□ -1.22
CXCR4-202ENST00000409817 TBC1D14Q9P2M4 693 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 ZDHHC2Q9UIJ5 367 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 APPL1Q9UKG1 709 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 HS3ST2Q9Y278 367 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 ZNF711Q9Y462 761 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 SLC30A1Q9Y6M5 507 aa7.45□□□□□ -1.22
CXCR4-202ENST00000409817 MTCL1Q9Y4B5 1905 aaKnown RBP7.44□□□□□ -1.22
CXCR4-202ENST00000409817 HELZP42694 1942 aaKnown RBP7.44□□□□□ -1.22
CXCR4-202ENST00000409817 A0A0J9YYE9 177 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 TMEM238LA0A1B0GVL6 79 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 RGSL1A5PLK6 1076 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 H3BMM5 538 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 GRM6O15303 877 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 BUD23O43709 281 aaKnown RBP7.44□□□□□ -1.22
CXCR4-202ENST00000409817 CIB2O75838 187 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 TRBC1P01850 177 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 RPS3P23396 243 aaKnown RBP eCLIP7.44□□□□□ -1.22
CXCR4-202ENST00000409817 SERPINA4P29622 427 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 INHBCP55103 352 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 MXRA7P84157 204 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 TIAL1Q01085 375 aaKnown RBP eCLIP7.44□□□□□ -1.22
CXCR4-202ENST00000409817 LMAN2Q12907 356 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 KLF10Q13118 480 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 PTPRCAPQ14761 206 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 LSM12Q3MHD2 195 aaKnown RBP7.44□□□□□ -1.22
CXCR4-202ENST00000409817 ZNF678Q5SXM1 525 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 WLSQ5T9L3 541 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 VWA5B1Q5TIE3 1220 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 ZDHHC20Q5W0Z9 365 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 ELMSAN1Q6PJG2 1045 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 TXNDC11Q6PKC3 985 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 NET1Q7Z628 596 aaPredicted RBP7.44□□□□□ -1.22
CXCR4-202ENST00000409817 SCUBE1Q8IWY4 988 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 CMTM8Q8IZV2 173 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 APCDD1Q8J025 514 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 SPATA6LQ8N4H0 392 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 EFHBQ8N7U6 833 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 OR2AP1Q8NGE2 309 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 RP9Q8TA86 221 aaKnown RBP7.44□□□□□ -1.22
CXCR4-202ENST00000409817 WFDC5Q8TCV5 224 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 MAPK15Q8TD08 544 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 PIH1D2Q8WWB5 315 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 HERVK_113Q902F9 699 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 BIRC8Q96P09 236 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 NSUN5Q96P11 429 aaKnown RBP7.44□□□□□ -1.22
CXCR4-202ENST00000409817 TACO1Q9BSH4 297 aaKnown RBP7.44□□□□□ -1.22
CXCR4-202ENST00000409817 RTKNQ9BST9 563 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 CPEB1Q9BZB8 566 aaKnown RBP7.44□□□□□ -1.22
CXCR4-202ENST00000409817 DENND2DQ9H6A0 471 aaPredicted RBP7.44□□□□□ -1.22
CXCR4-202ENST00000409817 ALG9Q9H6U8 611 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 EBF2Q9HAK2 575 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 LIN7BQ9HAP6 207 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 TLR9Q9NR96 1032 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 DZANK1Q9NVP4 752 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 TRMT6Q9UJA5 497 aaKnown RBP7.44□□□□□ -1.22
CXCR4-202ENST00000409817 ATXN7L1Q9ULK2 861 aaPredicted RBP7.44□□□□□ -1.22
CXCR4-202ENST00000409817 PLA2G4CQ9UP65 541 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 SLC4A7Q9Y6M7 1214 aa7.44□□□□□ -1.22
CXCR4-202ENST00000409817 A8MUI8 341 aa7.43□□□□□ -1.22
CXCR4-202ENST00000409817 METTL12A8MUP2 240 aa7.43□□□□□ -1.22
CXCR4-202ENST00000409817 E9PBE3 544 aa7.43□□□□□ -1.22
CXCR4-202ENST00000409817 C5orf67F2Z3F1 127 aa7.43□□□□□ -1.22
CXCR4-202ENST00000409817 STX16-NPEPL1H3BU86 382 aa7.43□□□□□ -1.22
CXCR4-202ENST00000409817 STX16O14662 325 aa7.43□□□□□ -1.22
CXCR4-202ENST00000409817 PRMT5O14744 637 aaPredicted RBP7.43□□□□□ -1.22
CXCR4-202ENST00000409817 DCXO43602 365 aa7.43□□□□□ -1.22
CXCR4-202ENST00000409817 ZBTB14O43829 449 aa7.43□□□□□ -1.22
CXCR4-202ENST00000409817 KLHL41O60662 606 aa7.43□□□□□ -1.22
CXCR4-202ENST00000409817 PEX11AO75192 247 aa7.43□□□□□ -1.22
CXCR4-202ENST00000409817 SLC4A1P02730 911 aa7.43□□□□□ -1.22
CXCR4-202ENST00000409817 RB1P06400 928 aa7.43□□□□□ -1.22
CXCR4-202ENST00000409817 FGF4P08620 206 aa7.43□□□□□ -1.22
CXCR4-202ENST00000409817 COX4I1P13073 169 aa7.43□□□□□ -1.22
CXCR4-202ENST00000409817 ZNF7P17097 686 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms