RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 CHAF1BQ13112 559 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 TMEM132DQ14C87 1099 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 ZBTB6Q15916 424 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 CYP2A13Q16696 494 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 PDCD4Q53EL6 469 aaKnown RBP6.33□□□□□ -1.4
LSM5-203ENST00000409782 ZC2HC1CQ53FD0 456 aaPredicted RBP6.33□□□□□ -1.4
LSM5-203ENST00000409782 ARMC3Q5W041 872 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 RESP18Q5W5W9 173 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 B3GNTL1Q67FW5 361 aaPredicted RBP6.33□□□□□ -1.4
LSM5-203ENST00000409782 ADALQ6DHV7 355 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 SLC8B1Q6J4K2 584 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 ACSM6Q6P461 480 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 SHC4Q6S5L8 630 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 PALB2Q86YC2 1186 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 BRSK2Q8IWQ3 736 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 FUKQ8N0W3 1084 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 TMEM132CQ8N3T6 1108 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 BEST2Q8NFU1 509 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 Q8TCH9 128 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 POMGNT1Q8WZA1 660 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 NELL1Q92832 810 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 EDAQ92838 391 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 DVL3Q92997 716 aaPredicted RBP6.33□□□□□ -1.4
LSM5-203ENST00000409782 DHX58Q96C10 678 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 ZNF707Q96C28 371 aaPredicted RBP6.33□□□□□ -1.4
LSM5-203ENST00000409782 WDYHV1Q96HA8 205 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 VPS50Q96JG6 964 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 ACCSQ96QU6 501 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 CDK5RAP1Q96SZ6 601 aaKnown RBP6.33□□□□□ -1.4
LSM5-203ENST00000409782 SLC25A18Q9H1K4 315 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 ASB7Q9H672 318 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 TMEM206Q9H813 350 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 WDR6Q9NNW5 1121 aaKnown RBP6.33□□□□□ -1.4
LSM5-203ENST00000409782 SLC22A11Q9NSA0 550 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 PANK4Q9NVE7 773 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 INTS13Q9NVM9 706 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 HCFC1R1Q9NWW0 138 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 GIMAP2Q9UG22 337 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 AGO2Q9UKV8 859 aaKnown RBP6.33□□□□□ -1.4
LSM5-203ENST00000409782 MAFFQ9ULX9 164 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 CAMK2AQ9UQM7 478 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 C2CD2Q9Y426 696 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 ATP6V1DQ9Y5K8 247 aa6.33□□□□□ -1.4
LSM5-203ENST00000409782 MTCL1Q9Y4B5 1905 aaKnown RBP6.33□□□□□ -1.4
LSM5-203ENST00000409782 C5orf42Q9H799 3197 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 DOCK8Q8NF50 2099 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 TSC2P49815 1807 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 hCG_1807616A0A1W2PRN6 198 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 LACTBL1A8MY62 500 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 PSMD9O00233 223 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 SLC16A3O15427 465 aaKnown RBP6.32□□□□□ -1.4
LSM5-203ENST00000409782 ADAM12O43184 909 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 PGM3O95394 542 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 ADRB1P08588 477 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 TYMPP19971 482 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 MATN1P21941 496 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 COMTP21964 271 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 SP100P23497 879 aaPredicted RBP6.32□□□□□ -1.4
LSM5-203ENST00000409782 PRKCHP24723 683 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 ADRA1DP25100 572 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 ADSSP30520 456 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 APOBEC3AP31941 199 aaPredicted RBP6.32□□□□□ -1.4
LSM5-203ENST00000409782 OR1D2P34982 312 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 ACTN2P35609 894 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 VAV2P52735 878 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 CDH15P55291 814 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 RPL7AP62424 266 aaKnown RBP6.32□□□□□ -1.4
LSM5-203ENST00000409782 HHEXQ03014 270 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 SIGLEC14Q08ET2 396 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 DNASE1L3Q13609 305 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 PPM1LQ5SGD2 360 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 TPGS2Q68CL5 300 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 ANKRD40Q6AI12 368 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 JADE1Q6IE81 842 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 CYP20A1Q6UW02 462 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 GSPT2Q8IYD1 628 aaKnown RBP6.32□□□□□ -1.4
LSM5-203ENST00000409782 UBALD2Q8IYN6 164 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 ULK2Q8IYT8 1036 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 OR52L2PQ8NGH6 319 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 SAAL1Q96ER3 474 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 C5orf34Q96MH7 638 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 KLC2Q9H0B6 622 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 GLOD4Q9HC38 313 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 GALNT9Q9HCQ5 603 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 PDE11AQ9HCR9 933 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 CD248Q9HCU0 757 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 SEPT11Q9NVA2 429 aaKnown RBP6.32□□□□□ -1.4
LSM5-203ENST00000409782 ALKBH4Q9NXW9 302 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 MPP6Q9NZW5 540 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 TBC1D7Q9P0N9 293 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 EPS15L1Q9UBC2 864 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 FBXL5Q9UKA1 691 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 RCOR1Q9UKL0 485 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 PCDHA7Q9UN72 937 aa6.32□□□□□ -1.4
LSM5-203ENST00000409782 ANK1P16157 1881 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 CCDC187A0A096LP49 1063 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 A0A1W2PQM1 296 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 TMEM221A6NGB7 291 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 AGAP5A6NIR3 686 aa6.31□□□□□ -1.4
LSM5-203ENST00000409782 OR6C75A6NL08 312 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms