RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 SFTPCP11686 197 aa14.56□□□□□ -0.08
CBX3-203ENST00000409747 CDKN2BP42772 138 aa14.56□□□□□ -0.08
CBX3-203ENST00000409747 SRSF6Q13247 344 aaKnown RBP14.56□□□□□ -0.08
CBX3-203ENST00000409747 INSCQ1MX18 579 aa14.56□□□□□ -0.08
CBX3-203ENST00000409747 MFSD7Q6UXD7 560 aa14.56□□□□□ -0.08
CBX3-203ENST00000409747 LRRTM4Q86VH4 590 aa14.56□□□□□ -0.08
CBX3-203ENST00000409747 IL22RA1Q8N6P7 574 aa14.56□□□□□ -0.08
CBX3-203ENST00000409747 NCSTNQ92542 709 aa14.56□□□□□ -0.08
CBX3-203ENST00000409747 TEKT5Q96M29 485 aa14.56□□□□□ -0.08
CBX3-203ENST00000409747 ZPBPQ9BS86 351 aa14.56□□□□□ -0.08
CBX3-203ENST00000409747 TRABDQ9H4I3 376 aa14.56□□□□□ -0.08
CBX3-203ENST00000409747 UCK1Q9HA47 277 aa14.56□□□□□ -0.08
CBX3-203ENST00000409747 KLC4Q9NSK0 619 aa14.56□□□□□ -0.08
CBX3-203ENST00000409747 CPNE7Q9UBL6 633 aa14.56□□□□□ -0.08
CBX3-203ENST00000409747 B3GALT1Q9Y5Z6 326 aa14.56□□□□□ -0.08
CBX3-203ENST00000409747 ADGRG1Q9Y653 693 aa14.56□□□□□ -0.08
CBX3-203ENST00000409747 J3QKU1 62 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 CHUKO15111 745 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 KMOO15229 486 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 PMPCBO75439 489 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 PTPN3P26045 913 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 MAPK9P45984 424 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 NOP2P46087 812 aaKnown RBP14.55□□□□□ -0.08
CBX3-203ENST00000409747 HADHBP55084 474 aaKnown RBP14.55□□□□□ -0.08
CBX3-203ENST00000409747 TAZQ16635 292 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 TFDP3Q5H9I0 405 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 SNAP47Q5SQN1 464 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 ZDHHC20Q5W0Z9 365 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 ADGRG6Q86SQ4 1221 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 PLXDC1Q8IUK5 500 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 TRIM48Q8IWZ4 208 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 RNF214Q8ND24 703 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 SPATA22Q8NHS9 363 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 P3H4Q92791 437 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 NKD1Q969G9 470 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 VPS35Q96QK1 796 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 VAT1Q99536 393 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 TIMM29Q9BSF4 260 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 LUC7LQ9NQ29 371 aaKnown RBP14.55□□□□□ -0.08
CBX3-203ENST00000409747 FAM153AQ9UHL3 310 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 PIEZO2Q9H5I5 2752 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 SDK2Q58EX2 2172 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 CST8O60676 142 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 BPIP17213 487 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 VCLP18206 1134 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 UGT1A3P35503 534 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 CRTC3Q6UUV7 619 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 CEACAM20Q6UY09 585 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 SPOCD1Q6ZMY3 1216 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 ARHGAP22Q7Z5H3 698 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 EXTL1Q92935 676 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 PMEPA1Q969W9 287 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 ARFGAP3Q9NP61 516 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 OCIAD1Q9NX40 245 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.55□□□□□ -0.082e-7■■■□□ 18.1
CBX3-203ENST00000409747 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.55□□□□□ -0.08
CBX3-203ENST00000409747 HYOU1Q9Y4L1 999 aa14.55□□□□□ -0.08
CBX3-203ENST00000409747 BOD1L1Q8NFC6 3051 aa14.54□□□□□ -0.08
CBX3-203ENST00000409747 A8MU76 341 aa14.54□□□□□ -0.08
CBX3-203ENST00000409747 VIPP01282 170 aa14.54□□□□□ -0.08
CBX3-203ENST00000409747 EPOP01588 193 aa14.54□□□□□ -0.08
CBX3-203ENST00000409747 XRCC1P18887 633 aaPredicted RBP14.54□□□□□ -0.08
CBX3-203ENST00000409747 HMGCLP35914 325 aa14.54□□□□□ -0.08
CBX3-203ENST00000409747 ARSDP51689 593 aa14.54□□□□□ -0.08
CBX3-203ENST00000409747 UBE2IP63279 158 aaKnown RBP14.54□□□□□ -0.08
CBX3-203ENST00000409747 MC2RQ01718 297 aa14.54□□□□□ -0.08
CBX3-203ENST00000409747 GTF2H3Q13889 308 aa14.54□□□□□ -0.08
CBX3-203ENST00000409747 LINC00303Q3SY05 128 aa14.54□□□□□ -0.08
CBX3-203ENST00000409747 KAZNQ674X7 775 aa14.54□□□□□ -0.08
CBX3-203ENST00000409747 ANKS6Q68DC2 871 aa14.54□□□□□ -0.08
CBX3-203ENST00000409747 CACNA2D3Q8IZS8 1091 aa14.54□□□□□ -0.08
CBX3-203ENST00000409747 BMPERQ8N8U9 685 aa14.54□□□□□ -0.08
CBX3-203ENST00000409747 JPH3Q8WXH2 748 aaPredicted RBP14.54□□□□□ -0.08
CBX3-203ENST00000409747 ZCCHC2Q9C0B9 1178 aaKnown RBP14.54□□□□□ -0.08
CBX3-203ENST00000409747 PRDM8Q9NQV8 689 aa14.54□□□□□ -0.08
CBX3-203ENST00000409747 FBXO8Q9NRD0 319 aa14.54□□□□□ -0.08
CBX3-203ENST00000409747 HACD3Q9P035 362 aa14.54□□□□□ -0.08
CBX3-203ENST00000409747 KLHL8Q9P2G9 620 aaPredicted RBP14.54□□□□□ -0.08
CBX3-203ENST00000409747 ALG6Q9Y672 507 aa14.54□□□□□ -0.08
CBX3-203ENST00000409747 PDZK1P1A8MUH7 402 aa14.53□□□□□ -0.08
CBX3-203ENST00000409747 HACD1B0YJ81 288 aa14.53□□□□□ -0.08
CBX3-203ENST00000409747 CAPN5O15484 640 aaPredicted RBP14.53□□□□□ -0.08
CBX3-203ENST00000409747 RAD1O60671 282 aa14.53□□□□□ -0.08
CBX3-203ENST00000409747 CDK14O94921 469 aa14.53□□□□□ -0.08
CBX3-203ENST00000409747 ZRANB2O95218 330 aaKnown RBP eCLIP14.53□□□□□ -0.08
CBX3-203ENST00000409747 ANKRD34CP0C6C1 535 aa14.53□□□□□ -0.08
CBX3-203ENST00000409747 PECAM1P16284 738 aaPredicted RBP14.53□□□□□ -0.08
CBX3-203ENST00000409747 ZNF7P17097 686 aaPredicted RBP14.53□□□□□ -0.08
CBX3-203ENST00000409747 MAGEA1P43355 309 aa14.53□□□□□ -0.08
CBX3-203ENST00000409747 TBX2Q13207 712 aaPredicted RBP14.53□□□□□ -0.08
CBX3-203ENST00000409747 PLA2G4EQ3MJ16 856 aa14.53□□□□□ -0.08
CBX3-203ENST00000409747 ZNF648Q5T619 568 aaPredicted RBP14.53□□□□□ -0.08
CBX3-203ENST00000409747 B4GALNT4Q76KP1 1039 aa14.53□□□□□ -0.08
CBX3-203ENST00000409747 CCDC50Q8IVM0 306 aa14.53□□□□□ -0.08
CBX3-203ENST00000409747 RBM12BQ8IXT5 1001 aaKnown RBP14.53□□□□□ -0.08
CBX3-203ENST00000409747 KATNAL2Q8IYT4 538 aa14.53□□□□□ -0.08
CBX3-203ENST00000409747 DTX3LQ8TDB6 740 aa14.53□□□□□ -0.08
CBX3-203ENST00000409747 BRSK1Q8TDC3 778 aa14.53□□□□□ -0.08
CBX3-203ENST00000409747 KIAA1143Q96AT1 154 aaPredicted RBP14.53□□□□□ -0.08
CBX3-203ENST00000409747 RBM41Q96IZ5 413 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms