RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 CHMP6Q96FZ7 201 aa12.68□□□□□ -0.38
CHRNA1-205ENST00000409542 EXOC2Q96KP1 924 aa12.68□□□□□ -0.38
CHRNA1-205ENST00000409542 SELENOSQ9BQE4 189 aa12.68□□□□□ -0.38
CHRNA1-205ENST00000409542 SLC12A9Q9BXP2 914 aa12.68□□□□□ -0.38
CHRNA1-205ENST00000409542 PCDH12Q9NPG4 1184 aa12.68□□□□□ -0.38
CHRNA1-205ENST00000409542 LRIT1Q9P2V4 623 aa12.68□□□□□ -0.38
CHRNA1-205ENST00000409542 DKK3Q9UBP4 350 aa12.68□□□□□ -0.38
CHRNA1-205ENST00000409542 LHX3Q9UBR4 397 aa12.68□□□□□ -0.38
CHRNA1-205ENST00000409542 DNPEPQ9ULA0 475 aa12.68□□□□□ -0.38
CHRNA1-205ENST00000409542 MFHAS1Q9Y4C4 1052 aa12.68□□□□□ -0.38
CHRNA1-205ENST00000409542 ARHGEF17Q96PE2 2063 aaPredicted RBP12.68□□□□□ -0.38
CHRNA1-205ENST00000409542 LRRD1A4D1F6 860 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 RAMP2O60895 175 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 ACSL3O95573 720 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 SFTPCP11686 197 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 ETFBP38117 255 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 LIG3P49916 1009 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 GEMIN4P57678 1058 aaKnown RBP12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 MORF4L2Q15014 288 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 IGFBP7Q16270 282 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 ZFYVE27Q5T4F4 411 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 PHF19Q5T6S3 580 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 TAF8Q7Z7C8 310 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 PYROXD2Q8N2H3 581 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 RIBC1Q8N443 379 aaPredicted RBP12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 OTUD6BQ8N6M0 293 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 TTC13Q8NBP0 860 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 OR6C4Q8NGE1 309 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 SLC35B2Q8TB61 432 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 RXFP2Q8WXD0 754 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 HMCESQ96FZ2 354 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 WDR92Q96MX6 357 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 TTC25Q96NG3 672 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 ZNF317Q96PQ6 595 aaPredicted RBP12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 CCDC77Q9BR77 488 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 PHACTR1Q9C0D0 580 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 TMEM168Q9H0V1 697 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 RDH14Q9HBH5 336 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 PCDH9Q9HC56 1237 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 FGF22Q9HCT0 170 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 INTS9Q9NV88 658 aaKnown RBP12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 ZNF148Q9UQR1 794 aa12.67□□□□□ -0.38
CHRNA1-205ENST00000409542 NBPF19A0A087WUL8 3843 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 B4DGG1 531 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 LRCH4O75427 683 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 IGSF6O95976 241 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 GM2AP17900 193 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 HTR1BP28222 390 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 RFC1P35251 1148 aaPredicted RBP12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 SLCO1A2P46721 670 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 VPS41P49754 854 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 OR1D5P58170 312 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 RHOAP61586 193 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 UBAP2LQ14157 1087 aaKnown RBP12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 KYNUQ16719 465 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 UGP2Q16851 508 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 P3H1Q32P28 736 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 C14orf28Q4W4Y0 310 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 GKAP1Q5VSY0 366 aaPredicted RBP12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 KAZNQ674X7 775 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 TXNRD3NBQ6F5E7 133 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 BBS12Q6ZW61 710 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 ARCQ7LC44 396 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 EXOC3L1Q86VI1 746 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 ZNF354CQ86Y25 554 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 CACNA2D3Q8IZS8 1091 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 RCBTB1Q8NDN9 531 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 P3H4Q92791 437 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 TBC1D31Q96DN5 1066 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 SEC16BQ96JE7 1060 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 CMKLR1Q99788 373 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 LGR4Q9BXB1 951 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 SHOC2Q9UQ13 582 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 ACTL7BQ9Y614 415 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 DGKBQ9Y6T7 804 aa12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 UTP20O75691 2785 aaKnown RBP12.66□□□□□ -0.38
CHRNA1-205ENST00000409542 TSPAN11A1L157 253 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 FGF3P11487 239 aaPredicted RBP12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 PNLIPP16233 465 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 XPAP23025 273 aaPredicted RBP12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 MAGEA4P43358 317 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 ARSEP51690 589 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 MAZP56270 477 aaKnown RBP12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 HDAC4P56524 1084 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 RAD51Q06609 339 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 AGERQ15109 404 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 QPCTQ16769 361 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 LONRF1Q17RB8 773 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 AMZ1Q400G9 498 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 INO80DQ53TQ3 878 aaPredicted RBP12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 EFHC2Q5JST6 749 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 CPLX4Q7Z7G2 160 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 ARFGAP1Q8N6T3 406 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 ZSCAN1Q8NBB4 408 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 OR56A4Q8NGH8 313 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 NKD1Q969G9 470 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 TMEM159Q96B96 161 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 FAM118BQ9BPY3 351 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 NUDT22Q9BRQ3 303 aa12.65□□□□□ -0.38
CHRNA1-205ENST00000409542 SUV39H2Q9H5I1 410 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms