RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 PDGFBP01127 241 aaPredicted RBP15.5■□□□□ 0.07
SHANK2-204ENST00000409530 PKMP14618 531 aaKnown RBP15.5■□□□□ 0.07
SHANK2-204ENST00000409530 ZNF7P17097 686 aaPredicted RBP15.5■□□□□ 0.07
SHANK2-204ENST00000409530 PTGER3P43115 390 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 CCT5P48643 541 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 B4GALNT1Q00973 533 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 SLC18A2Q05940 514 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 ZDHHC20Q5W0Z9 365 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 TIFABQ6ZNK6 161 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 ZNF687Q8N1G0 1237 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 TRAM1L1Q8N609 369 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 FAM160A2Q8N612 972 aaPredicted RBP15.5■□□□□ 0.07
SHANK2-204ENST00000409530 BEND7Q8N7W2 519 aaPredicted RBP15.5■□□□□ 0.07
SHANK2-204ENST00000409530 FRMD1Q8N878 549 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 EXT2Q93063 718 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 LENG8Q96PV6 779 aaPredicted RBP15.5■□□□□ 0.07
SHANK2-204ENST00000409530 TCF12Q99081 682 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 CNOT10Q9H9A5 744 aaKnown RBP15.5■□□□□ 0.07
SHANK2-204ENST00000409530 FBRSQ9HAH7 460 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 CPSF2Q9P2I0 782 aaKnown RBP15.5■□□□□ 0.07
SHANK2-204ENST00000409530 GRID1Q9ULK0 1009 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 PSMD11O00231 422 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 SLC31A1O15431 190 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 PRPF4O43172 522 aaKnown RBP eCLIP15.5■□□□□ 0.072e-13■■□□□ 12.7
SHANK2-204ENST00000409530 TSPAN6O43657 245 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 PLRG1O43660 514 aaKnown RBP15.5■□□□□ 0.07
SHANK2-204ENST00000409530 CCDC166P0CW27 439 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 PBLDP30039 288 aaPredicted RBP15.5■□□□□ 0.07
SHANK2-204ENST00000409530 STARD6P59095 220 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 DCDC1P59894 354 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 GABPB1Q06547 395 aaPredicted RBP15.5■□□□□ 0.07
SHANK2-204ENST00000409530 SF3A3Q12874 501 aaKnown RBP eCLIP15.5■□□□□ 0.076e-6■□□□□ 10.9
SHANK2-204ENST00000409530 GPR33Q49SQ1 333 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 CERS6Q6ZMG9 384 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 TBC1D1Q86TI0 1168 aaPredicted RBP15.5■□□□□ 0.07
SHANK2-204ENST00000409530 ANKRD49Q8WVL7 239 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 NXNL1Q96CM4 212 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 SGF29Q96ES7 293 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 DCUN1D1Q96GG9 259 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 TSNARE1Q96NA8 513 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 CAPS2Q9BXY5 557 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 TMEM216Q9P0N5 145 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 INVSQ9Y283 1065 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 VPS9D1Q9Y2B5 631 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 ACOT9Q9Y305 439 aa15.5■□□□□ 0.07
SHANK2-204ENST00000409530 TRBV5-4A0A0C4DH59 114 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 GLRA3O75311 464 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 MPOP05164 745 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 MSH3P20585 1137 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 FDXRP22570 491 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 PPARGP37231 505 aaPredicted RBP15.49■□□□□ 0.07
SHANK2-204ENST00000409530 MDH1P40925 334 aaKnown RBP15.49■□□□□ 0.07
SHANK2-204ENST00000409530 MAGEA12P43365 314 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 WDR4P57081 412 aaKnown RBP15.49■□□□□ 0.07
SHANK2-204ENST00000409530 DLG1Q12959 904 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 FZD5Q13467 585 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 FGL2Q14314 439 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 TMEM207Q6UWW9 146 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 GALNT7Q86SF2 657 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 CENPLQ8N0S6 344 aaPredicted RBP15.49■□□□□ 0.07
SHANK2-204ENST00000409530 PJA1Q8NG27 643 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 ALKBH8Q96BT7 664 aaKnown RBP15.49■□□□□ 0.07
SHANK2-204ENST00000409530 TSPAN17Q96FV3 270 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 SGSM3Q96HU1 749 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 FAM107BQ9H098 131 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 MBNL1Q9NR56 388 aaKnown RBP15.49■□□□□ 0.07
SHANK2-204ENST00000409530 ZDHHC3Q9NYG2 299 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 GNPTGQ9UJJ9 305 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 MED16Q9Y2X0 877 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 OR1A2Q9Y585 309 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 TK2O00142 265 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 VPS26AO75436 327 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 ZWINTO95229 277 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 SOD1P00441 154 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 NEFHP12036 1026 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 SUOXP51687 545 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 DGKEP52429 567 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 TIAL1Q01085 375 aaKnown RBP eCLIP15.49■□□□□ 0.075e-7■■■■■ 58.4
SHANK2-204ENST00000409530 CCDC15Q0P6D6 951 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 DNAJC3Q13217 504 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 SGCGQ13326 291 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 IRF4Q15306 451 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 ZKSCAN8Q15776 578 aaPredicted RBP15.49■□□□□ 0.07
SHANK2-204ENST00000409530 PLA2G4EQ3MJ16 856 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 PAQR3Q6TCH7 311 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 SYT13Q7L8C5 426 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 UBALD2Q8IYN6 164 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 GIMAP7Q8NHV1 300 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 GLYATL1Q969I3 302 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 ULK4Q96C45 1275 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 P2RY12Q9H244 342 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 TAS2R13Q9NYV9 303 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 EBF1Q9UH73 591 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 TRMT6Q9UJA5 497 aaKnown RBP15.49■□□□□ 0.07
SHANK2-204ENST00000409530 RUVBL2Q9Y230 463 aaKnown RBP15.49■□□□□ 0.07
SHANK2-204ENST00000409530 CA5BQ9Y2D0 317 aa15.49■□□□□ 0.07
SHANK2-204ENST00000409530 ASMTLO95671 621 aa15.48■□□□□ 0.07
SHANK2-204ENST00000409530 ESR1P03372 595 aa15.48■□□□□ 0.07
SHANK2-204ENST00000409530 BOP1Q14137 746 aaKnown RBP15.48■□□□□ 0.07
SHANK2-204ENST00000409530 HSF5Q4G112 596 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms