RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 POLR2EP19388 210 aaKnown RBP20.51■□□□□ 0.87
USP39-203ENST00000409470 ITGAXP20702 1163 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 CA5AP35218 305 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 RECQLP46063 649 aaPredicted RBP20.51■□□□□ 0.87
USP39-203ENST00000409470 CYLC2Q14093 348 aaPredicted RBP20.51■□□□□ 0.87
USP39-203ENST00000409470 EML3Q32P44 896 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 LRRC66Q68CR7 880 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 GPSM1Q86YR5 675 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 CBARPQ8N350 705 aaPredicted RBP20.51■□□□□ 0.87
USP39-203ENST00000409470 TRPC4APQ8TEL6 797 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 OTUB2Q96DC9 234 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 CCDC97Q96F63 343 aaPredicted RBP20.51■□□□□ 0.87
USP39-203ENST00000409470 ZNF641Q96N77 438 aaPredicted RBP20.51■□□□□ 0.87
USP39-203ENST00000409470 LBHD1Q9BQE6 289 aaPredicted RBP20.51■□□□□ 0.87
USP39-203ENST00000409470 CIPCQ9C0C6 399 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 SLC7A8Q9UHI5 535 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 A0A088AWK7 358 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 SLC9A3R1O14745 358 aaPredicted RBP20.51■□□□□ 0.87
USP39-203ENST00000409470 SNX2O60749 519 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 CDK14O94921 469 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 CHRM1P11229 460 aaPredicted RBP20.51■□□□□ 0.87
USP39-203ENST00000409470 ITGB6P18564 788 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 RPS3P23396 243 aaKnown RBP eCLIP20.51■□□□□ 0.873e-13■■■■□ 26.3
USP39-203ENST00000409470 ACRV1P26436 265 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 INHBCP55103 352 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 FBXO48Q5FWF7 155 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 ANKS6Q68DC2 871 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 DEFB107AQ8IZN7 70 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 AHI1Q8N157 1196 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 ENDOVQ8N8Q3 282 aaKnown RBP20.51■□□□□ 0.87
USP39-203ENST00000409470 CHST14Q8NCH0 376 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 NAT14Q8WUY8 206 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 MYLIPQ8WY64 445 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 ZNF707Q96C28 371 aaPredicted RBP20.51■□□□□ 0.87
USP39-203ENST00000409470 ZBTB26Q9HCK0 441 aa20.51■□□□□ 0.87
USP39-203ENST00000409470 TSR3Q9UJK0 312 aaKnown RBP20.51■□□□□ 0.87
USP39-203ENST00000409470 GRXCR1A8MXD5 290 aa20.5■□□□□ 0.87
USP39-203ENST00000409470 PPP6CO00743 305 aa20.5■□□□□ 0.87
USP39-203ENST00000409470 AIM2O14862 343 aa20.5■□□□□ 0.87
USP39-203ENST00000409470 TRIM24O15164 1050 aa20.5■□□□□ 0.87
USP39-203ENST00000409470 GPC4O75487 556 aa20.5■□□□□ 0.87
USP39-203ENST00000409470 ANP32DO95626 131 aa20.5■□□□□ 0.87
USP39-203ENST00000409470 CD1EP15812 388 aa20.5■□□□□ 0.87
USP39-203ENST00000409470 WEE1P30291 646 aa20.5■□□□□ 0.87
USP39-203ENST00000409470 CLCQ05315 142 aa20.5■□□□□ 0.87
USP39-203ENST00000409470 TRMT5Q32P41 509 aaKnown RBP20.5■□□□□ 0.87
USP39-203ENST00000409470 GPR33Q49SQ1 333 aa20.5■□□□□ 0.87
USP39-203ENST00000409470 C1orf146Q5VVC0 180 aa20.5■□□□□ 0.87
USP39-203ENST00000409470 TXNDC11Q6PKC3 985 aa20.5■□□□□ 0.87
USP39-203ENST00000409470 CD274Q9NZQ7 290 aa20.5■□□□□ 0.87
USP39-203ENST00000409470 ERVW-1Q9UQF0 538 aa20.5■□□□□ 0.87
USP39-203ENST00000409470 PPIL1Q9Y3C6 166 aa20.5■□□□□ 0.87
USP39-203ENST00000409470 TRBV5-4A0A0C4DH59 114 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 STX16-NPEPL1H3BU86 382 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 STX16O14662 325 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 CA3P07451 260 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 HSPA1AP0DMV8 641 aaKnown RBP20.49■□□□□ 0.87
USP39-203ENST00000409470 HSPA1BP0DMV9 641 aaKnown RBP20.49■□□□□ 0.87
USP39-203ENST00000409470 LCP2Q13094 533 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 FAM219BQ5XKK7 198 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 RIPOR1Q6ZS17 1223 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 PELI3Q8N2H9 469 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 CLDN19Q8N6F1 224 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 GPR26Q8NDV2 337 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 CFAP61Q8NHU2 1237 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 ITFG1Q8TB96 612 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 C19orf60Q96EN9 201 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 SEMA4BQ9NPR2 832 aaPredicted RBP20.49■□□□□ 0.87
USP39-203ENST00000409470 MARK1Q9P0L2 795 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 TMCO1Q9UM00 188 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 PRSS21Q9Y6M0 314 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 SCN8AQ9UQD0 1980 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 AZIN1O14977 448 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 UBDO15205 165 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 FGF4P08620 206 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 TCF3P15923 654 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 NUDT2P50583 147 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 PTPN5P54829 565 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 HERC3Q15034 1050 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 PPP1R3AQ16821 1122 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 TMEM215Q68D42 235 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 GDPD4Q6W3E5 623 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 CYB5D2Q8WUJ1 264 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 KLHL32Q96NJ5 620 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 PANX3Q96QZ0 392 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 MCCC1Q96RQ3 725 aaPredicted RBP20.49■□□□□ 0.87
USP39-203ENST00000409470 SLC2A11Q9BYW1 496 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 BRD9Q9H8M2 597 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 MRGBPQ9NV56 204 aa20.49■□□□□ 0.87
USP39-203ENST00000409470 A0A1W2PQ67 120 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 KLK8O60259 260 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 KRT36O76013 467 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 SLC25A14O95258 325 aaPredicted RBP20.48■□□□□ 0.87
USP39-203ENST00000409470 TRIM16O95361 564 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 PSMG1O95456 288 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 RPS17P08708 135 aaKnown RBP20.48■□□□□ 0.87
USP39-203ENST00000409470 ARSAP15289 507 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 NNMTP40261 264 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 AGTR2P50052 363 aa20.48■□□□□ 0.87
USP39-203ENST00000409470 POLR2LP62875 67 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms