RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 TSPAN9O75954 239 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 CNTN5O94779 1100 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 ARHGEF15O94989 841 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 HTR1AP08908 422 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 HOXB6P17509 224 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 MIPP30301 263 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 RYKP34925 604 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 GMPRP36959 345 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 MRPL19P49406 292 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 TUFMP49411 452 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 ATXN3P54252 364 aaPredicted RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 CXCR4P61073 352 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 MTM1Q13496 603 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 GRIN2CQ14957 1233 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 POLD3Q15054 466 aaPredicted RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 ADPRMQ3LIE5 342 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 ESCO2Q56NI9 601 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 PPM1JQ5JR12 505 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 MARCH8Q5T0T0 291 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 RBM20Q5T481 1227 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 TDRD10Q5VZ19 366 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 STEAP3Q658P3 488 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 DESI1Q6ICB0 168 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 NEK5Q6P3R8 708 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 CCBE1Q6UXH8 406 aaPredicted RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 CYP2R1Q6VVX0 501 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 GK5Q6ZS86 529 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 HDDC2Q7Z4H3 204 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 SPRED2Q7Z698 418 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 ZBTB33Q86T24 672 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 LURAP1LQ8IV03 231 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 KIAA0319LQ8IZA0 1049 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 OFCC1Q8IZS5 231 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 MPP5Q8N3R9 675 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 DCLK2Q8N568 766 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 BEND7Q8N7W2 519 aaPredicted RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 SPPL2BQ8TCT7 592 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 BPIFB1Q8TDL5 484 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 TRAPPC12Q8WVT3 735 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 MYLIPQ8WY64 445 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 ARNTL2Q8WYA1 636 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 TIFAQ96CG3 184 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 MCRS1Q96EZ8 462 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 ST6GAL2Q96JF0 529 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 RNF170Q96K19 258 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 NODALQ96S42 347 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 C2orf49Q9BVC5 232 aaPredicted RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 ACE2Q9BYF1 805 aaPredicted RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 NSMCE4AQ9NXX6 385 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 MKLN1Q9UL63 735 aa10.57□□□□□ -0.72
NIF3L1-204ENST00000409357 PNMA8CA0A1B0GUJ8 204 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 A6NL46 340 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 HACD1B0YJ81 288 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 AP3B1O00203 1094 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 NEMP1O14524 444 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 ARHGAP33O14559 1287 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 CAPN5O15484 640 aaPredicted RBP10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 PDPK1O15530 556 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 SNAP29O95721 258 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 PIGRP01833 764 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 CXCL10P02778 98 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 C2P06681 752 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 POLBP06746 335 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 CHRNGP07510 517 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 PFKMP08237 780 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 THRBP10828 461 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 LRPAP1P30533 357 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 NPTX2P47972 431 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 SLC7A2P52569 658 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 NKX2-5P52952 324 aaPredicted RBP10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 ARSFP54793 590 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 DEFB103AP81534 67 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 MRPS15P82914 257 aaKnown RBP10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 DMP1Q13316 513 aaPredicted RBP10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 DPY19L1Q2PZI1 675 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 SMU1Q2TAY7 513 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 ANO4Q32M45 955 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 PLEKHG6Q3KR16 790 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 PLA2G4EQ3MJ16 856 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 ZC3H12BQ5HYM0 836 aaKnown RBP10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 TMEM198Q66K66 360 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 PTAR1Q7Z6K3 402 aaPredicted RBP10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 PLD6Q8N2A8 252 aaKnown RBP10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 TAB3Q8N5C8 712 aaPredicted RBP10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 PSD4Q8NDX1 1056 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 CHDHQ8NE62 594 aaPredicted RBP10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 FIG4Q92562 907 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 CERS2Q96G23 380 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 ZNF670Q9BS34 389 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 CCDC32Q9BV29 185 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 KIFC1Q9BW19 673 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 NKX2-4Q9H2Z4 354 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 ZNF576Q9H609 170 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 CDHR5Q9HBB8 845 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 TMEM45AQ9NWC5 275 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 KIAA1257Q9ULG3 409 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 DGKBQ9Y6T7 804 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 HSPE1-MOB4S4R3N1 261 aa10.56□□□□□ -0.72
NIF3L1-204ENST00000409357 PRRC2BQ5JSZ5 2229 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms