RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 OR52B6Q8NGF0 335 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 DIS3LQ8TF46 1054 aaKnown RBP9.77□□□□□ -0.85
MSH2-202ENST00000406134 FBXL20Q96IG2 436 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 SPATA17Q96L03 361 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 PSKH2Q96QS6 385 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 VCX3AQ9NNX9 186 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 PNPLA3Q9NST1 481 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 PRG3Q9Y2Y8 225 aaPredicted RBP9.77□□□□□ -0.85
MSH2-202ENST00000406134 NDUFAF1Q9Y375 327 aa9.77□□□□□ -0.85
MSH2-202ENST00000406134 HELZP42694 1942 aaKnown RBP9.77□□□□□ -0.85
MSH2-202ENST00000406134 SLC12A8A0AV02 714 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 DHRS12A0PJE2 317 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 SAC3D1A6NKF1 404 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 CLCN7P51798 805 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 HUNKP57058 714 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 YBEYP58557 167 aaPredicted RBP9.76□□□□□ -0.85
MSH2-202ENST00000406134 FOXM1Q08050 763 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 LETMD1Q6P1Q0 360 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 DHRS4L2Q6PKH6 230 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 FBXO32Q969P5 355 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 P2RY12Q9H244 342 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 MRPL40Q9NQ50 206 aaKnown RBP9.76□□□□□ -0.85
MSH2-202ENST00000406134 OAZ3Q9UMX2 235 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 PCDHB5Q9Y5E4 795 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 ADAM12O43184 909 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 GPC4O75487 556 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 RASAL1O95294 804 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 GJB5O95377 273 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 CYBBP04839 570 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 CDK9P50750 372 aaKnown RBP9.76□□□□□ -0.85
MSH2-202ENST00000406134 ERVPABLB-1P60509 514 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 HPCAP84074 193 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 ARF5P84085 180 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 LAMB3Q13751 1172 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 ELMSAN1Q6PJG2 1045 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 SCIMPQ6UWF3 145 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 TTC30BQ8N4P2 665 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 EEF1AKMT1Q8WVE0 214 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 ASB2Q96Q27 587 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 ATXN10Q9UBB4 475 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 EBF1Q9UH73 591 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 ZFP37Q9Y6Q3 630 aaPredicted RBP9.76□□□□□ -0.85
MSH2-202ENST00000406134 REV3LO60673 3130 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 C5orf42Q9H799 3197 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 TMEM88BA6NKF7 163 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 OR7A17O14581 309 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 STX16O14662 325 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 EOMESO95936 686 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 LBPP18428 481 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 RFC2P35250 354 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 POLR2IP36954 125 aaKnown RBP9.76□□□□□ -0.85
MSH2-202ENST00000406134 OR1G1P47890 313 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 HTR6P50406 440 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 RPS24P62847 133 aaKnown RBP9.76□□□□□ -0.85
MSH2-202ENST00000406134 TUBA4AP68366 448 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 KIF19Q2TAC6 998 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 C10orf120Q5SQS8 335 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 CXorf57Q6NSI4 855 aaKnown RBP9.76□□□□□ -0.85
MSH2-202ENST00000406134 ARHGAP22Q7Z5H3 698 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 TMEM199Q8N511 208 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 DCBLD1Q8N8Z6 715 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 GOLM1Q8NBJ4 401 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 PBXIP1Q96AQ6 731 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 CDK15Q96Q40 435 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 TRIM54Q9BYV2 358 aa9.76□□□□□ -0.85
MSH2-202ENST00000406134 SOX17Q9H6I2 414 aaPredicted RBP9.76□□□□□ -0.85
MSH2-202ENST00000406134 ESRRBO95718 433 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 IDO1P14902 403 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 TCF3P15923 654 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 CD9P21926 228 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 GNA12Q03113 381 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 KCTD21Q4G0X4 260 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 MRNIPQ6NTE8 343 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 ZBTB49Q6ZSB9 765 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 SFRP1Q8N474 314 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 FBXO39Q8N4B4 442 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 AFAP1L2Q8N4X5 818 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 PACRGLQ8N7B6 248 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 KLHL23Q8NBE8 558 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 BPIFB1Q8TDL5 484 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 DDI1Q8WTU0 396 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 EZH1Q92800 747 aaPredicted RBP9.75□□□□□ -0.85
MSH2-202ENST00000406134 CASD1Q96PB1 797 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 ADI1Q9BV57 179 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 TTLL2Q9BWV7 592 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 NPLQ9BXD5 320 aaPredicted RBP9.75□□□□□ -0.85
MSH2-202ENST00000406134 MANSC4A6NHS7 340 aaPredicted RBP9.75□□□□□ -0.85
MSH2-202ENST00000406134 IQCF5A8MTL0 148 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 SUPT3HB4E1H0 165 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 SYN3O14994 580 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 SUPT3HO75486 399 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 PRSS23O95084 383 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 OR4D2P58180 307 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 ADARB1P78563 741 aaKnown RBP9.75□□□□□ -0.85
MSH2-202ENST00000406134 PRKCZQ05513 592 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 MERTKQ12866 999 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 TRAF2Q12933 501 aa9.75□□□□□ -0.85
MSH2-202ENST00000406134 TAF1AQ15573 450 aaPredicted RBP9.75□□□□□ -0.85
MSH2-202ENST00000406134 NFE2Q16621 373 aaPredicted RBP9.75□□□□□ -0.85
MSH2-202ENST00000406134 TBCELQ5QJ74 424 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms