RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 POLR1DQ9Y2S0 133 aa13.27□□□□□ -0.29
SNED1-205ENST00000405547 SMIM35A0A1B0GVV1 85 aa13.27□□□□□ -0.29
SNED1-205ENST00000405547 STK16O75716 305 aa13.27□□□□□ -0.29
SNED1-205ENST00000405547 ASB9Q96DX5 294 aa13.27□□□□□ -0.29
SNED1-205ENST00000405547 EXOC2Q96KP1 924 aa13.27□□□□□ -0.29
SNED1-205ENST00000405547 PIGUQ9H490 435 aa13.27□□□□□ -0.29
SNED1-205ENST00000405547 KCTD5Q9NXV2 234 aa13.27□□□□□ -0.29
SNED1-205ENST00000405547 MANSC4A6NHS7 340 aaPredicted RBP13.27□□□□□ -0.29
SNED1-205ENST00000405547 FADS2P1A8MWK0 482 aa13.27□□□□□ -0.29
SNED1-205ENST00000405547 RASSF1Q9NS23 344 aa13.27□□□□□ -0.29
SNED1-205ENST00000405547 NUDT4Q9NZJ9 180 aa13.27□□□□□ -0.29
SNED1-205ENST00000405547 STOML2Q9UJZ1 356 aa13.27□□□□□ -0.29
SNED1-205ENST00000405547 SLC28A2O43868 658 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 FABP3P05413 133 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 IL23RQ5VWK5 629 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 TPGS1Q6ZTW0 290 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 FSTL5Q8N475 847 aaPredicted RBP13.26□□□□□ -0.29
SNED1-205ENST00000405547 POMGNT2Q8NAT1 580 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 CMASQ8NFW8 434 aaPredicted RBP13.26□□□□□ -0.29
SNED1-205ENST00000405547 GRPEL2Q8TAA5 225 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 MTFR1LQ9H019 292 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 XYLBO75191 536 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 HDCP19113 662 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 AOC1P19801 751 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 FAUP35544 74 aaKnown RBP13.26□□□□□ -0.29
SNED1-205ENST00000405547 STARP49675 285 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 CXCR3P49682 368 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 ATN1P54259 1190 aaPredicted RBP13.26□□□□□ -0.29
SNED1-205ENST00000405547 OTOP3Q7RTS5 596 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 TOP1MTQ969P6 601 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 FAM105AQ9NUU6 356 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 MOXD2PA6NHM9 499 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 SEPHS1P49903 392 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 GSCP56915 257 aaPredicted RBP13.26□□□□□ -0.29
SNED1-205ENST00000405547 TRIM32Q13049 653 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 TCEA2Q15560 299 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 FNDC3BQ53EP0 1204 aaKnown RBP13.26□□□□□ -0.29
SNED1-205ENST00000405547 HLA-DQA1Q5Y7H0 255 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 GRIN3AQ8TCU5 1115 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 VMP1Q96GC9 406 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 S100A13Q99584 98 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 IGSF9Q9P2J2 1179 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 PEX16Q9Y5Y5 336 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 URADA6NGE7 173 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 KLF11O14901 512 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 MATN3O15232 486 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 AIREO43918 545 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 UBE2R2Q712K3 238 aaPredicted RBP13.26□□□□□ -0.29
SNED1-205ENST00000405547 CAMTA1Q9Y6Y1 1673 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 WWP2O00308 870 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 CLDN11O75508 207 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 GJB1P08034 283 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 HKDC1Q2TB90 917 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 NOMO2Q5JPE7 1267 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 ZNF513Q8N8E2 541 aaPredicted RBP13.26□□□□□ -0.29
SNED1-205ENST00000405547 TPK1Q9H3S4 243 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 SEC14L3Q9UDX4 400 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 NUDT14O95848 222 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 NMBRP28336 390 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 MBTD1Q05BQ5 628 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 CBX3Q13185 183 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 DPYSL2Q16555 572 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 C5orf22Q49AR2 442 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 TMPRSS11AQ6ZMR5 421 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 TIFAQ96CG3 184 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 AHSA2Q719I0 299 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 RASAL3Q86YV0 1011 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 C11orf65Q8NCR3 313 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 PCDH19Q8TAB3 1148 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 SLC35B2Q8TB61 432 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 RASSF5Q8WWW0 418 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 TSSK3Q96PN8 268 aa13.26□□□□□ -0.29
SNED1-205ENST00000405547 YTHDF1Q9BYJ9 559 aaKnown RBP13.26□□□□□ -0.29
SNED1-205ENST00000405547 E9PAM4 449 aa13.25□□□□□ -0.29
SNED1-205ENST00000405547 GLUD2P49448 558 aa13.25□□□□□ -0.29
SNED1-205ENST00000405547 PTPN5P54829 565 aa13.25□□□□□ -0.29
SNED1-205ENST00000405547 ECT2LQ008S8 904 aa13.25□□□□□ -0.29
SNED1-205ENST00000405547 TRMT10BQ6PF06 316 aaKnown RBP13.25□□□□□ -0.29
SNED1-205ENST00000405547 RNF19BQ6ZMZ0 732 aa13.25□□□□□ -0.29
SNED1-205ENST00000405547 CHPFQ8IZ52 775 aa13.25□□□□□ -0.29
SNED1-205ENST00000405547 SNX7Q9UNH6 387 aa13.25□□□□□ -0.29
SNED1-205ENST00000405547 MAFBQ9Y5Q3 323 aaPredicted RBP13.25□□□□□ -0.29
SNED1-205ENST00000405547 ZNF780BQ9Y6R6 833 aa13.25□□□□□ -0.29
SNED1-205ENST00000405547 NUP188Q5SRE5 1749 aa13.25□□□□□ -0.29
SNED1-205ENST00000405547 AQP12BA6NM10 295 aa13.25□□□□□ -0.29
SNED1-205ENST00000405547 ASLP04424 464 aa13.25□□□□□ -0.29
SNED1-205ENST00000405547 RAP2AP10114 183 aa13.25□□□□□ -0.29
SNED1-205ENST00000405547 SLC5A3P53794 718 aa13.25□□□□□ -0.29
SNED1-205ENST00000405547 DEF8Q6ZN54 512 aa13.25□□□□□ -0.29
SNED1-205ENST00000405547 AQP12AQ8IXF9 295 aa13.25□□□□□ -0.29
SNED1-205ENST00000405547 TMCO6Q96DC7 493 aa13.25□□□□□ -0.29
SNED1-205ENST00000405547 TUBGCP5Q96RT8 1024 aa13.25□□□□□ -0.29
SNED1-205ENST00000405547 PCDHA2Q9Y5H9 948 aa13.25□□□□□ -0.29
SNED1-205ENST00000405547 RBM47A0AV96 593 aaKnown RBP13.25□□□□□ -0.29
SNED1-205ENST00000405547 FAM92AA1XBS5 289 aa13.25□□□□□ -0.29
SNED1-205ENST00000405547 SLC30A4O14863 429 aa13.25□□□□□ -0.29
SNED1-205ENST00000405547 HLA-DQA2P01906 255 aa13.25□□□□□ -0.29
SNED1-205ENST00000405547 RHOQP17081 205 aa13.25□□□□□ -0.29
SNED1-205ENST00000405547 CDH5P33151 784 aaPredicted RBP13.25□□□□□ -0.29
SNED1-205ENST00000405547 RBM48Q5RL73 367 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms