RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 NEMP2A6NFY4 417 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 TRIM38O00635 465 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 YY2O15391 372 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 FLRT2O43155 660 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 NUAK1O60285 661 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 GRK6P43250 576 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 PRAMEP78395 509 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 DHX9Q08211 1270 aaKnown RBP16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 ELOCQ15369 112 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 DEFB133Q30KQ1 61 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 BBS9Q3SYG4 887 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 DNTTIP2Q5QJE6 756 aaKnown RBP16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 PSAPL1Q6NUJ1 521 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 SERPINA9Q86WD7 417 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 GALNT13Q8IUC8 556 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 NXPE1Q8N323 547 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 FSTL5Q8N475 847 aaPredicted RBP16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 CEP112Q8N8E3 955 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 RASGEF1AQ8N9B8 481 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 OR4L1Q8NH43 312 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 NAT14Q8WUY8 206 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 PEX13Q92968 403 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 ULK4Q96C45 1275 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 CCDC97Q96F63 343 aaPredicted RBP16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 FCRL3Q96P31 734 aaPredicted RBP16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 OR2M4Q96R27 311 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 RTKNQ9BST9 563 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 RAB17Q9H0T7 212 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 RMI1Q9H9A7 625 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 GRHL1Q9NZI5 618 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 SAMD15Q9P1V8 674 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 WHRNQ9P202 907 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 PCOLCE2Q9UKZ9 415 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 ST14Q9Y5Y6 855 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 CSNK1G3Q9Y6M4 447 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 RIF1Q5UIP0 2472 aaKnown RBP16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 RALGAPA1Q6GYQ0 2036 aa16.99■□□□□ 0.31
PTCHD3P3-201ENST00000403073 TRBV5-4A0A0C4DH59 114 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 DCDC2BA2VCK2 349 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 SMAPO00193 183 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 GRID2O43424 1007 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 VEGFDO43915 354 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 ANXA6P08133 673 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 MSH3P20585 1137 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 SDHBP21912 280 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 AK4P27144 223 aaPredicted RBP16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 AKT1P31749 480 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 FOXN2P32314 431 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 CTBSQ01459 385 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 CALCOCO2Q13137 446 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 SMAD1Q15797 465 aaKnown RBP16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 ANKRD20A4Q4UJ75 823 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 DNAJC21Q5F1R6 531 aaKnown RBP16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 HP1BP3Q5SSJ5 553 aaPredicted RBP16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 AFTPHQ6ULP2 937 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 CRTC3Q6UUV7 619 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 DET1Q7L5Y6 550 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 CHST15Q7LFX5 561 aaPredicted RBP16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 TAF8Q7Z7C8 310 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 NRROSQ86YC3 692 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 STAMBPL1Q96FJ0 436 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 TTC25Q96NG3 672 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 TRNAU1APQ9NX07 287 aaKnown RBP16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 DLL3Q9NYJ7 618 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 DOLKQ9UPQ8 538 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 GVINP1Q7Z2Y8 2422 aa16.98■□□□□ 0.31
PTCHD3P3-201ENST00000403073 FAM237BA0A1B0GVD1 139 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 LMO7DNF2Z398 122 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 CHUKO15111 745 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 SIGLEC6O43699 453 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 CBFA2T3O75081 653 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 VAPBO95292 243 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 MYF5P13349 255 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 ACRV1P26436 265 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 CTSCP53634 463 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 B4GALNT1Q00973 533 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 GTF2H3Q13889 308 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 SEMA3AQ14563 771 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 DBN1Q16643 649 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 INAVAQ3KP66 663 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 ARMC3Q5W041 872 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 TMEM135Q86UB9 458 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 GKN2Q86XP6 184 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 ZNF547Q8IVP9 402 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 IGDCC3Q8IVU1 814 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 PDIK1LQ8N165 341 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 OR4C6Q8NH72 309 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 GPBAR1Q8TDU6 330 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 ZNF669Q96BR6 464 aaPredicted RBP16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 SGF29Q96ES7 293 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 COPS8Q99627 209 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 BOCQ9BWV1 1114 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 ZDHHC3Q9NYG2 299 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 NLGN3Q9NZ94 848 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 MARCH4Q9P2E8 410 aaPredicted RBP16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 RPS6KL1Q9Y6S9 549 aa16.97■□□□□ 0.31
PTCHD3P3-201ENST00000403073 ESYT3A0FGR9 886 aa16.96■□□□□ 0.31
PTCHD3P3-201ENST00000403073 OR2AG2A6NM03 316 aa16.96■□□□□ 0.31
PTCHD3P3-201ENST00000403073 GPR89AB7ZAQ6 455 aa16.96■□□□□ 0.31
PTCHD3P3-201ENST00000403073 GOLGA8KD6RF30 607 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms